Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919175
Identifier: 117919175
GI number: 117919175
Start: 839748
End: 840716
Strand: Direct
Name: 117919175
Synonym: Shewana3_0723
Alternate gene names: NA
Gene position: 839748-840716 (Clockwise)
Preceding gene: 117919174
Following gene: 117919176
Centisome position: 16.89
GC content: 48.09
Gene sequence:
>969_bases ATGCAAATAACATGGAAGAAGGTCACCGGAGTTGGTTTATTTGTTGTTTTAATTGGTTATCTAGTGAGTGTGTGGTGGAG TATCGAACCCGATACCCTGACTCCACAACAGCTGACGGCCACAGAGAAGAATGTCGTGGGTTATGCCACCACCACGTCGT TGATCCTGACCGTTGAAACATTGCTGGATAAGCAGGGTGGTTGGTTATCAAACGATGTGATGCCCCCTTCAATTTTTATG GATAACATGCCCGCGTTTGAGTACGGCGCTTTAGAGCAAGTTCGTGATTTAGCACTGATTATGCGTAAAGAATTTAGCCG CTCCCAGTCCCAATCCGCTGCGGATAAGGATCTAAGTGAAGCGCAGGCTAAGCTAAATATCGACCATACCAGTTGGTTAG TGCCTAGCGCCGAGAGCGAATACCGCGATGGCGTTAAGCTGCTCAAGCTATATCGCGCGCGTATGATGGATCCAAACAAT CAGGATGCTCAGTTTTACGCCCGTGCCGACAACCTCAACGAGTGGCTCAAAGAAGTCCAAAAACGTTTAGGTAGCATGTC TCAACGTTTATCGGCGAGTGTCGGGCAGGAGCGATTAAATACCGATTTAGCCGGCGACAATGCTGCGCGTCAATCGACCC CGAATTTAGCCAGCCATCAGGTGAAAACCAGCTGGTGGAAAATTGATGATGTGTTCTATGAGAGCCGTGGTGCCTCGTGG GCACTGCTGAATTTTATGCGTGCAGTCGAAGTCGACTTTGCTGACGTATTGAAAAAGAAAAATGCTGAGGTCAGCCTGAA ACAGATCATTCGTGAGCTGGAGGCAACTCAACAAACGGTTTGGAGCCCTGTGGTACTTAATGGCAGTGGTTTCGGTCTAG TCGCTAATCATTCATTGGTTATGGCTAACTATGTGTCCCGTGCGAATGCCGCGGTGATTGATTTAACGAACTTGCTATCT CAAGGTTAA
Upstream 100 bases:
>100_bases TTGACGATGGCGAGAATCTAACGATTACATTACCTGTTGCTAAGCAGGCCGAGAATGCTGCTGAACATGAGCATCATCAC CATCATTAAGGAGTCACTTG
Downstream 100 bases:
>100_bases TTATGAAAAAAACACTCCTCGCCAGTGCGGTATTAGGATGCTTAATGGCCACGTCTGCCCAAGCGGCTACTGTGGTTGGA TTCAAAATTGGTGGTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MQITWKKVTGVGLFVVLIGYLVSVWWSIEPDTLTPQQLTATEKNVVGYATTTSLILTVETLLDKQGGWLSNDVMPPSIFM DNMPAFEYGALEQVRDLALIMRKEFSRSQSQSAADKDLSEAQAKLNIDHTSWLVPSAESEYRDGVKLLKLYRARMMDPNN QDAQFYARADNLNEWLKEVQKRLGSMSQRLSASVGQERLNTDLAGDNAARQSTPNLASHQVKTSWWKIDDVFYESRGASW ALLNFMRAVEVDFADVLKKKNAEVSLKQIIRELEATQQTVWSPVVLNGSGFGLVANHSLVMANYVSRANAAVIDLTNLLS QG
Sequences:
>Translated_322_residues MQITWKKVTGVGLFVVLIGYLVSVWWSIEPDTLTPQQLTATEKNVVGYATTTSLILTVETLLDKQGGWLSNDVMPPSIFM DNMPAFEYGALEQVRDLALIMRKEFSRSQSQSAADKDLSEAQAKLNIDHTSWLVPSAESEYRDGVKLLKLYRARMMDPNN QDAQFYARADNLNEWLKEVQKRLGSMSQRLSASVGQERLNTDLAGDNAARQSTPNLASHQVKTSWWKIDDVFYESRGASW ALLNFMRAVEVDFADVLKKKNAEVSLKQIIRELEATQQTVWSPVVLNGSGFGLVANHSLVMANYVSRANAAVIDLTNLLS QG >Mature_322_residues MQITWKKVTGVGLFVVLIGYLVSVWWSIEPDTLTPQQLTATEKNVVGYATTTSLILTVETLLDKQGGWLSNDVMPPSIFM DNMPAFEYGALEQVRDLALIMRKEFSRSQSQSAADKDLSEAQAKLNIDHTSWLVPSAESEYRDGVKLLKLYRARMMDPNN QDAQFYARADNLNEWLKEVQKRLGSMSQRLSASVGQERLNTDLAGDNAARQSTPNLASHQVKTSWWKIDDVFYESRGASW ALLNFMRAVEVDFADVLKKKNAEVSLKQIIRELEATQQTVWSPVVLNGSGFGLVANHSLVMANYVSRANAAVIDLTNLLS QG
Specific function: Unknown
COG id: COG5345
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36010; Mature: 36010
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITWKKVTGVGLFVVLIGYLVSVWWSIEPDTLTPQQLTATEKNVVGYATTTSLILTVET CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHH LLDKQGGWLSNDVMPPSIFMDNMPAFEYGALEQVRDLALIMRKEFSRSQSQSAADKDLSE HHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAKLNIDHTSWLVPSAESEYRDGVKLLKLYRARMMDPNNQDAQFYARADNLNEWLKEVQ HHHHCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHH KRLGSMSQRLSASVGQERLNTDLAGDNAARQSTPNLASHQVKTSWWKIDDVFYESRGASW HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHEEHHHHHHHCCCCHH ALLNFMRAVEVDFADVLKKKNAEVSLKQIIRELEATQQTVWSPVVLNGSGFGLVANHSLV HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCHHH MANYVSRANAAVIDLTNLLSQG HHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MQITWKKVTGVGLFVVLIGYLVSVWWSIEPDTLTPQQLTATEKNVVGYATTTSLILTVET CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHH LLDKQGGWLSNDVMPPSIFMDNMPAFEYGALEQVRDLALIMRKEFSRSQSQSAADKDLSE HHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAKLNIDHTSWLVPSAESEYRDGVKLLKLYRARMMDPNNQDAQFYARADNLNEWLKEVQ HHHHCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHH KRLGSMSQRLSASVGQERLNTDLAGDNAARQSTPNLASHQVKTSWWKIDDVFYESRGASW HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHEEHHHHHHHCCCCHH ALLNFMRAVEVDFADVLKKKNAEVSLKQIIRELEATQQTVWSPVVLNGSGFGLVANHSLV HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCHHH MANYVSRANAAVIDLTNLLSQG HHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA