Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is hflK [H]
Identifier: 117919052
GI number: 117919052
Start: 702512
End: 703657
Strand: Direct
Name: hflK [H]
Synonym: Shewana3_0599
Alternate gene names: 117919052
Gene position: 702512-703657 (Clockwise)
Preceding gene: 117919051
Following gene: 117919053
Centisome position: 14.13
GC content: 48.87
Gene sequence:
>1146_bases ATGGCTTGGAACGAGCCCGGTAACAAGGGTAATGATCCTTGGGGAAATAAAGGTGGTAACGACAAAGGACCACCAGACCT TGATGAGGTTTTTCGTAATCTTTCAAAACGCTTTGGCGGCAAAGGCAATGGCTCATCAGGCCAGAGCTTTAGTTCGTTCA GCTTAATCATCATTCTTGCCATCGCTTTTGTTGTTTGGGGACTCTCGGGTTTTTACACCATTAAAGAAGCTGAGCGTGGT GTTGCGCTGCGTTTTGGTCAGCACATTGGTGAGGTGGGACCTGGTCTGCATTGGAAGGCTACGTTTATAGACCAGATTTA TCCCGTTGATGTGCAATCTGTTCGCTCCATTCCTGCTTCTGGCAGCATGTTGACCTCAGATGAAAACGTCGTGAAGGTCG AGCTGGACGTACAGTATCGTATTCTTGATGCGTATTCTTATCTGTTCAGTGCCGTTGATGCGAATGCCAGCTTACGCGAA GCCACAGACAGTGCGCTGCGTTATGTTATCGGCCACAACAAGATGGACGATATTCTGACCACGGGTCGTGATGCGATTCG TCGCGATACTTGGAAAGAACTCGAGCGCATCATTGAGCCGTACAAATTAGGCTTAGCCATTGTTGACGTTAACTTTTTGC CTGCGCGTCCACCTGAAGAAGTGAAAGATGCTTTCGACGATGCGATTGCGGCACAAGAAGACGAACAACGCTTTATCCGT GAAGCCGAAGCTTATGCCCGTGAAGTTGAGCCTAAAGCGCGCGGTGAAGTTGAGCGTATGGCGCAACAAGCGAATGCCTA TAAAGAGCGTGAAATTCTTGAAGCTCGCGGTAAAGTGGCTCGTTTCGAGTTACTGTTGCCTGAGTACCAAGCGGCACCTG AAGTGACCCGCAAGCGTTTGTATCTCGATGCAATGCAACAGGTGATGACAGATACCAACAAGGTACTGATCGACGCGAAG AACAATGGCAATTTAATGTATTTGCCTTTAGACAAGTTAATGAAAGAGAAGCCTGTGACTACGCCAGAGGTTGAGCATAA GGCTCAGCAGAACGTCAATTCTTCATCTATGTCAACGACTCGCATTGGTGAGCCTTTGAGTGGACGCCCTTCTCGCGAGG ACCGTGCTCGCCAAGGGAGGGAGTAA
Upstream 100 bases:
>100_bases ACAGAGTCAGGGTGAGTTAGAAACCTTTATCTTCGATCCGTCGACAGAAAAGGCTGTTTGTTAATAATCTAATTTATTTC ATCCACTTATGGAGTGCTAA
Downstream 100 bases:
>100_bases TCCATGGGTAGATTAAGTATTGTTCTGATTGCCATCGTATTAGGCATAGGTCTGTCATCTGTGATGGTGGTTAACGAAGG CGAACGTGCGATTGTGGCGC
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSSGQSFSSFSLIIILAIAFVVWGLSGFYTIKEAERG VALRFGQHIGEVGPGLHWKATFIDQIYPVDVQSVRSIPASGSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLRE ATDSALRYVIGHNKMDDILTTGRDAIRRDTWKELERIIEPYKLGLAIVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFIR EAEAYAREVEPKARGEVERMAQQANAYKEREILEARGKVARFELLLPEYQAAPEVTRKRLYLDAMQQVMTDTNKVLIDAK NNGNLMYLPLDKLMKEKPVTTPEVEHKAQQNVNSSSMSTTRIGEPLSGRPSREDRARQGRE
Sequences:
>Translated_381_residues MAWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSSGQSFSSFSLIIILAIAFVVWGLSGFYTIKEAERG VALRFGQHIGEVGPGLHWKATFIDQIYPVDVQSVRSIPASGSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLRE ATDSALRYVIGHNKMDDILTTGRDAIRRDTWKELERIIEPYKLGLAIVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFIR EAEAYAREVEPKARGEVERMAQQANAYKEREILEARGKVARFELLLPEYQAAPEVTRKRLYLDAMQQVMTDTNKVLIDAK NNGNLMYLPLDKLMKEKPVTTPEVEHKAQQNVNSSSMSTTRIGEPLSGRPSREDRARQGRE >Mature_380_residues AWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSSGQSFSSFSLIIILAIAFVVWGLSGFYTIKEAERGV ALRFGQHIGEVGPGLHWKATFIDQIYPVDVQSVRSIPASGSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREA TDSALRYVIGHNKMDDILTTGRDAIRRDTWKELERIIEPYKLGLAIVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFIRE AEAYAREVEPKARGEVERMAQQANAYKEREILEARGKVARFELLLPEYQAAPEVTRKRLYLDAMQQVMTDTNKVLIDAKN NGNLMYLPLDKLMKEKPVTTPEVEHKAQQNVNSSSMSTTRIGEPLSGRPSREDRARQGRE
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=361, Percent_Identity=54.5706371191136, Blast_Score=359, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 42711; Mature: 42579
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSSGQSFSSFSLIIILA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IAFVVWGLSGFYTIKEAERGVALRFGQHIGEVGPGLHWKATFIDQIYPVDVQSVRSIPAS HHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCHHHHHCCCCC GSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREATDSALRYVIGHNKMDDILT CCEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH TGRDAIRRDTWKELERIIEPYKLGLAIVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFIR CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHH EAEAYAREVEPKARGEVERMAQQANAYKEREILEARGKVARFELLLPEYQAAPEVTRKRL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCHHHHHHHH YLDAMQQVMTDTNKVLIDAKNNGNLMYLPLDKLMKEKPVTTPEVEHKAQQNVNSSSMSTT HHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHH RIGEPLSGRPSREDRARQGRE HCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure AWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSSGQSFSSFSLIIILA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IAFVVWGLSGFYTIKEAERGVALRFGQHIGEVGPGLHWKATFIDQIYPVDVQSVRSIPAS HHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCHHHHHCCCCC GSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREATDSALRYVIGHNKMDDILT CCEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH TGRDAIRRDTWKELERIIEPYKLGLAIVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFIR CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHH EAEAYAREVEPKARGEVERMAQQANAYKEREILEARGKVARFELLLPEYQAAPEVTRKRL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCHHHHHHHH YLDAMQQVMTDTNKVLIDAKNNGNLMYLPLDKLMKEKPVTTPEVEHKAQQNVNSSSMSTT HHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHH RIGEPLSGRPSREDRARQGRE HCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]