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The map label for this gene is hupE [H]

Identifier: 117918852

GI number: 117918852

Start: 455318

End: 455896

Strand: Direct

Name: hupE [H]

Synonym: Shewana3_0395

Alternate gene names: 117918852

Gene position: 455318-455896 (Clockwise)

Preceding gene: 117918851

Following gene: 117918858

Centisome position: 9.16

GC content: 52.85

Gene sequence:

>579_bases
ATGGTGCGTTTAAGTTTGTTGCTGCTCTTGAGTCTATCTTTTATTGCCCCTGCCTCGGCGCACGAAATCCACTCCGGTGG
TGGTTTTATGGCGGGCTTTAACCATCCCGTTTTAGGCTTTGACCATCTCCTTGCCATGTTGAGTGTGGGCATGCTCAGTA
CGCAATTGGGCGGCCGCGCCATTTGGACTGTGCCTTTAGCCTTTGTGTGTTTTATGTTGGTCGGTGGCATTTTAGGCCTG
TATGCGATTCCGGTGCCCTTTGTCGAAATTGGCATTGCGCTATCTGTCTTATTGCTTGGGCTAGCGATAGCTTTTGACCG
CCAACTTCCGCTGTTGTTTGCCATGGCCTTTGTGGGCGTGTTTGCGATTTTCCACGGCCATGCCCATGGGATGGAAATGC
CCGAACTCGCCAGTCCCATACTCTATGCCTTCGGTTTCTTGTTTGGCACTGCGGTCATTCATCTTGGTGGGGTCATGTTA
GGATTAGGCATGCAGCGCCTGACGGGCCAGCGCCGCTTAATGCGGGTATCGGGCGTGGCGATTGCGGCTATGGGCGGATA
TTTACTCGCTGGCTTTTAA

Upstream 100 bases:

>100_bases
GCTTAAGGTGATAAGGATCAAAGATTGCTTCACGGCTTTGCCGTAGAGTGTTCACAATCATTTCACTCGGTTGTTACGCC
ATCACTAACAAGGAATTTGT

Downstream 100 bases:

>100_bases
TGGCTTAACGCGCCTTGAGTTGCTTAGTGCAATGATGGGCGCGGCGCAGCATTTGCGTGACCTGTCTTCGGCTGGCGTGC
ATGTCGGCATCCCCCACGCG

Product: HupE/UreJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVRLSLLLLLSLSFIAPASAHEIHSGGGFMAGFNHPVLGFDHLLAMLSVGMLSTQLGGRAIWTVPLAFVCFMLVGGILGL
YAIPVPFVEIGIALSVLLLGLAIAFDRQLPLLFAMAFVGVFAIFHGHAHGMEMPELASPILYAFGFLFGTAVIHLGGVML
GLGMQRLTGQRRLMRVSGVAIAAMGGYLLAGF

Sequences:

>Translated_192_residues
MVRLSLLLLLSLSFIAPASAHEIHSGGGFMAGFNHPVLGFDHLLAMLSVGMLSTQLGGRAIWTVPLAFVCFMLVGGILGL
YAIPVPFVEIGIALSVLLLGLAIAFDRQLPLLFAMAFVGVFAIFHGHAHGMEMPELASPILYAFGFLFGTAVIHLGGVML
GLGMQRLTGQRRLMRVSGVAIAAMGGYLLAGF
>Mature_192_residues
MVRLSLLLLLSLSFIAPASAHEIHSGGGFMAGFNHPVLGFDHLLAMLSVGMLSTQLGGRAIWTVPLAFVCFMLVGGILGL
YAIPVPFVEIGIALSVLLLGLAIAFDRQLPLLFAMAFVGVFAIFHGHAHGMEMPELASPILYAFGFLFGTAVIHLGGVML
GLGMQRLTGQRRLMRVSGVAIAAMGGYLLAGF

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 20252; Mature: 20252

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLSLLLLLSLSFIAPASAHEIHSGGGFMAGFNHPVLGFDHLLAMLSVGMLSTQLGGRA
CHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
IWTVPLAFVCFMLVGGILGLYAIPVPFVEIGIALSVLLLGLAIAFDRQLPLLFAMAFVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FAIFHGHAHGMEMPELASPILYAFGFLFGTAVIHLGGVMLGLGMQRLTGQRRLMRVSGVA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAMGGYLLAGF
HHHHHHHHHCCC
>Mature Secondary Structure
MVRLSLLLLLSLSFIAPASAHEIHSGGGFMAGFNHPVLGFDHLLAMLSVGMLSTQLGGRA
CHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
IWTVPLAFVCFMLVGGILGLYAIPVPFVEIGIALSVLLLGLAIAFDRQLPLLFAMAFVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FAIFHGHAHGMEMPELASPILYAFGFLFGTAVIHLGGVMLGLGMQRLTGQRRLMRVSGVA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAMGGYLLAGF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]