Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117918713

Identifier: 117918713

GI number: 117918713

Start: 287807

End: 288217

Strand: Direct

Name: 117918713

Synonym: Shewana3_0256

Alternate gene names: NA

Gene position: 287807-288217 (Clockwise)

Preceding gene: 117918712

Following gene: 117918714

Centisome position: 5.79

GC content: 49.64

Gene sequence:

>411_bases
ATGTCATGGACGCAGCAACAGGTTCACCCCTTAGCCGAACAGACTCGGCTCATCTGCCGTTATCATAGGTTATCGACCCG
CTTTGAGTTGATTGCCGAACATGCCCCCGCCGCTAGCGCGGGGCCTGATTCAAAACTCCCCGAACCGTATTTAGCCAATC
CTCCTATGGGCGTTTGGAGCGAGCTTATCCTGCGTCAATCTTTATATTATTGGCCGAGAACGATCCCATTTAATATCGCG
CAGCACGGCTACCGACTGCATATTTGGCCCTTGTTGATGTGGCGCAGCCGTGTGACCTGCGAGCAGTCGGGGAAGGTGGT
GATTATTGAATGTCTCGATGAACGAAAACGCCGTTCGATAATTCGTTGGTGTTATTTCGGCATAATGAATTTATTACGTA
TAATCAGTTAA

Upstream 100 bases:

>100_bases
CCGAGGTGATTATTCACCAAGATCCTGTGCAGGTGGAACCTAGTGCTGCGGCCTCATCATAATAAGTTTGAATCGTTATT
AAACAGCCAAAGGAATGGTT

Downstream 100 bases:

>100_bases
TACTTAGTATTTAATATTGAGTATGTTATTTAATACTTAAGTATATAAATTTTGTTATTGTTTAATTTAAAGCTGAATAC
TTCCTGTATAAAACGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWSELILRQSLYYWPRTIPFNIA
QHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSIIRWCYFGIMNLLRIIS

Sequences:

>Translated_136_residues
MSWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWSELILRQSLYYWPRTIPFNIA
QHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSIIRWCYFGIMNLLRIIS
>Mature_135_residues
SWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWSELILRQSLYYWPRTIPFNIAQ
HGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSIIRWCYFGIMNLLRIIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16118; Mature: 15987

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
ELILRQSLYYWPRTIPFNIAQHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSI
HHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHH
IRWCYFGIMNLLRIIS
HHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
ELILRQSLYYWPRTIPFNIAQHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSI
HHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHH
IRWCYFGIMNLLRIIS
HHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA