Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918713
Identifier: 117918713
GI number: 117918713
Start: 287807
End: 288217
Strand: Direct
Name: 117918713
Synonym: Shewana3_0256
Alternate gene names: NA
Gene position: 287807-288217 (Clockwise)
Preceding gene: 117918712
Following gene: 117918714
Centisome position: 5.79
GC content: 49.64
Gene sequence:
>411_bases ATGTCATGGACGCAGCAACAGGTTCACCCCTTAGCCGAACAGACTCGGCTCATCTGCCGTTATCATAGGTTATCGACCCG CTTTGAGTTGATTGCCGAACATGCCCCCGCCGCTAGCGCGGGGCCTGATTCAAAACTCCCCGAACCGTATTTAGCCAATC CTCCTATGGGCGTTTGGAGCGAGCTTATCCTGCGTCAATCTTTATATTATTGGCCGAGAACGATCCCATTTAATATCGCG CAGCACGGCTACCGACTGCATATTTGGCCCTTGTTGATGTGGCGCAGCCGTGTGACCTGCGAGCAGTCGGGGAAGGTGGT GATTATTGAATGTCTCGATGAACGAAAACGCCGTTCGATAATTCGTTGGTGTTATTTCGGCATAATGAATTTATTACGTA TAATCAGTTAA
Upstream 100 bases:
>100_bases CCGAGGTGATTATTCACCAAGATCCTGTGCAGGTGGAACCTAGTGCTGCGGCCTCATCATAATAAGTTTGAATCGTTATT AAACAGCCAAAGGAATGGTT
Downstream 100 bases:
>100_bases TACTTAGTATTTAATATTGAGTATGTTATTTAATACTTAAGTATATAAATTTTGTTATTGTTTAATTTAAAGCTGAATAC TTCCTGTATAAAACGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWSELILRQSLYYWPRTIPFNIA QHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSIIRWCYFGIMNLLRIIS
Sequences:
>Translated_136_residues MSWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWSELILRQSLYYWPRTIPFNIA QHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSIIRWCYFGIMNLLRIIS >Mature_135_residues SWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWSELILRQSLYYWPRTIPFNIAQ HGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSIIRWCYFGIMNLLRIIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16118; Mature: 15987
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH ELILRQSLYYWPRTIPFNIAQHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSI HHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHH IRWCYFGIMNLLRIIS HHHHHHHHHHHHHHHC >Mature Secondary Structure SWTQQQVHPLAEQTRLICRYHRLSTRFELIAEHAPAASAGPDSKLPEPYLANPPMGVWS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH ELILRQSLYYWPRTIPFNIAQHGYRLHIWPLLMWRSRVTCEQSGKVVIIECLDERKRRSI HHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHH IRWCYFGIMNLLRIIS HHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA