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The map label for this gene is yobA [C]

Identifier: 117676228

GI number: 117676228

Start: 172928

End: 173350

Strand: Direct

Name: yobA [C]

Synonym: Shewana3_4289

Alternate gene names: 117676228

Gene position: 172928-173350 (Clockwise)

Preceding gene: 117676227

Following gene: 117676229

Centisome position: 61.99

GC content: 45.39

Gene sequence:

>423_bases
ATGAAATTATTTAACAACGTTTTAGTCGTAACAAGTCTATTCCTGAGTGCTTCAGCATTTGCTCATGTCGGACTGAGCAG
TTCTATGCCCCCTAACGGTGCCATGCTAAGTCAAGCCCCAACAACGCTTGAACTGACCTTTACGGCTCCGGTACGTTTGG
TCAAATTAACAATGCAAGATGAGAAGCAGCAAAGCGTACCGTTAACATTACCTTCAAGTGCGGCCAGTCAAGCTGAATTT
TCATTCGCCCTACCAGCATTAAACGCAGCTAATTACACAGTTAACTGGATGATCATGGGTGATGACGGTCATAAGATGAA
AGGCAACATGAGCTTTATGCTTCACGACTCTGGCATGAACACTCGCAGTGCACCGCCTATGACAATGGAGCATGAGACTA
GCGAGCACACTGCACATCAATAA

Upstream 100 bases:

>100_bases
CTGAGTTATAAGCTTGGCGCCAAGATGTTAGCTAAGCCAATATTAAATCATTTATGTAAACCGTTTTTCGATCGTTAAAA
ACAATATAAAAGGAAATATC

Downstream 100 bases:

>100_bases
GTGGATGAGTAAACATGATATTAACCGTATTTGAAATATCGGTGTTGATATCTAAATGGGTTATCTATCTGAGTGTTGCC
GCTGTTATTGGCGGCACATT

Product: copper resistance protein CopC

Products: NA

Alternate protein names: Copper Resistance Protein; Copper Resistance

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKLFNNVLVVTSLFLSASAFAHVGLSSSMPPNGAMLSQAPTTLELTFTAPVRLVKLTMQDEKQQSVPLTLPSSAASQAEF
SFALPALNAANYTVNWMIMGDDGHKMKGNMSFMLHDSGMNTRSAPPMTMEHETSEHTAHQ

Sequences:

>Translated_140_residues
MKLFNNVLVVTSLFLSASAFAHVGLSSSMPPNGAMLSQAPTTLELTFTAPVRLVKLTMQDEKQQSVPLTLPSSAASQAEF
SFALPALNAANYTVNWMIMGDDGHKMKGNMSFMLHDSGMNTRSAPPMTMEHETSEHTAHQ
>Mature_140_residues
MKLFNNVLVVTSLFLSASAFAHVGLSSSMPPNGAMLSQAPTTLELTFTAPVRLVKLTMQDEKQQSVPLTLPSSAASQAEF
SFALPALNAANYTVNWMIMGDDGHKMKGNMSFMLHDSGMNTRSAPPMTMEHETSEHTAHQ

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15158; Mature: 15158

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.6 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFNNVLVVTSLFLSASAFAHVGLSSSMPPNGAMLSQAPTTLELTFTAPVRLVKLTMQD
CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEECCCCCEEEEEEECCEEEEEEEECC
EKQQSVPLTLPSSAASQAEFSFALPALNAANYTVNWMIMGDDGHKMKGNMSFMLHDSGMN
CCCCCCCEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCEECCCEEEEEECCCCC
TRSAPPMTMEHETSEHTAHQ
CCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MKLFNNVLVVTSLFLSASAFAHVGLSSSMPPNGAMLSQAPTTLELTFTAPVRLVKLTMQD
CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEECCCCCEEEEEEECCEEEEEEEECC
EKQQSVPLTLPSSAASQAEFSFALPALNAANYTVNWMIMGDDGHKMKGNMSFMLHDSGMN
CCCCCCCEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCEECCCEEEEEECCCCC
TRSAPPMTMEHETSEHTAHQ
CCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA