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The map label for this gene is copB [H]

Identifier: 117676227

GI number: 117676227

Start: 172099

End: 172812

Strand: Direct

Name: copB [H]

Synonym: Shewana3_4288

Alternate gene names: 117676227

Gene position: 172099-172812 (Clockwise)

Preceding gene: 117676226

Following gene: 117676228

Centisome position: 61.7

GC content: 44.4

Gene sequence:

>714_bases
ATGAATAAAACGAATTTAGTGGCATTGGGACTGTTGAGTCTGAGCGCCTCATTGGCTAGCTCAGCTGTGTTTGCCGGCGG
TAATGATGATCCTCTATTAACAAAAGTCATGCTGGATCAATTTGAAAAAGGCGTGGATCCGCAAGATCCTACCCAGTTTA
GTGCACAAGCCTGGTTAGGTTACGATTTGAATAAGTTGTGGCTTAAAACCGAAGGTGAATATTCAAATAGTGATAAGCAA
GACCTTGAAATTCAGGCTCTTTACAGTAAGCCCATCGCACCATACTGGGATGTACAATTCGGTATTAAAACCGATATCAA
ACCGACGCCGAACCGTAATTGGGCTGTGATTGGGGTTCAAGGGTTAGCGCCATATTTTTTTGATATTGACGCGGCCTTAT
TCATCGGTGAACAAGGCCGTACGGCTATGCGGTTGAGTGCGGAATATGAACTGTTAATCACTCAAAAATTGATACTCACA
CCTGAAGTAGAAGTTAATTTATTTGGTAAGGACGATGCTGAACTTGGAATAGGCTCAGGCTTATCTGACGTCAGTGCAGG
GCTGCGATTGAGATACGAGATTGTTCGAGAGTTCGCACCCTATATCGGTGTTGATTGGCGTCAGAAGCTCGGTAATACCG
CCGATTACGCCCGAAGTGAAGGGGAAGATACACAAGAAACCCAGTTTGTTATTGGTTTTAGCGCGTGGTTCTAA

Upstream 100 bases:

>100_bases
CAAAAGGGCAATGGGCATATCATTGCCACTTGTTATTCCACATGCCAGGCATGTTCAGAAAAGTCGTGGTGAAATAAGGG
GTATACAAAGGGGTATACAG

Downstream 100 bases:

>100_bases
GACCTCGTTCGTACACTGAGTTATAAGCTTGGCGCCAAGATGTTAGCTAAGCCAATATTAAATCATTTATGTAAACCGTT
TTTCGATCGTTAAAAACAAT

Product: copper resistance B precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNKTNLVALGLLSLSASLASSAVFAGGNDDPLLTKVMLDQFEKGVDPQDPTQFSAQAWLGYDLNKLWLKTEGEYSNSDKQ
DLEIQALYSKPIAPYWDVQFGIKTDIKPTPNRNWAVIGVQGLAPYFFDIDAALFIGEQGRTAMRLSAEYELLITQKLILT
PEVEVNLFGKDDAELGIGSGLSDVSAGLRLRYEIVREFAPYIGVDWRQKLGNTADYARSEGEDTQETQFVIGFSAWF

Sequences:

>Translated_237_residues
MNKTNLVALGLLSLSASLASSAVFAGGNDDPLLTKVMLDQFEKGVDPQDPTQFSAQAWLGYDLNKLWLKTEGEYSNSDKQ
DLEIQALYSKPIAPYWDVQFGIKTDIKPTPNRNWAVIGVQGLAPYFFDIDAALFIGEQGRTAMRLSAEYELLITQKLILT
PEVEVNLFGKDDAELGIGSGLSDVSAGLRLRYEIVREFAPYIGVDWRQKLGNTADYARSEGEDTQETQFVIGFSAWF
>Mature_237_residues
MNKTNLVALGLLSLSASLASSAVFAGGNDDPLLTKVMLDQFEKGVDPQDPTQFSAQAWLGYDLNKLWLKTEGEYSNSDKQ
DLEIQALYSKPIAPYWDVQFGIKTDIKPTPNRNWAVIGVQGLAPYFFDIDAALFIGEQGRTAMRLSAEYELLITQKLILT
PEVEVNLFGKDDAELGIGSGLSDVSAGLRLRYEIVREFAPYIGVDWRQKLGNTADYARSEGEDTQETQFVIGFSAWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 26305; Mature: 26305

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTNLVALGLLSLSASLASSAVFAGGNDDPLLTKVMLDQFEKGVDPQDPTQFSAQAWLG
CCCCCEEEEHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
YDLNKLWLKTEGEYSNSDKQDLEIQALYSKPIAPYWDVQFGIKTDIKPTPNRNWAVIGVQ
CCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEECCCCCCCCCEEEEEEC
GLAPYFFDIDAALFIGEQGRTAMRLSAEYELLITQKLILTPEVEVNLFGKDDAELGIGSG
CCCCEEEECCEEEEECCCCCEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCCC
LSDVSAGLRLRYEIVREFAPYIGVDWRQKLGNTADYARSEGEDTQETQFVIGFSAWF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNKTNLVALGLLSLSASLASSAVFAGGNDDPLLTKVMLDQFEKGVDPQDPTQFSAQAWLG
CCCCCEEEEHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
YDLNKLWLKTEGEYSNSDKQDLEIQALYSKPIAPYWDVQFGIKTDIKPTPNRNWAVIGVQ
CCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEECCCCCCCCCEEEEEEC
GLAPYFFDIDAALFIGEQGRTAMRLSAEYELLITQKLILTPEVEVNLFGKDDAELGIGSG
CCCCEEEECCEEEEECCCCCEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCCC
LSDVSAGLRLRYEIVREFAPYIGVDWRQKLGNTADYARSEGEDTQETQFVIGFSAWF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]