Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
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Accession | NC_008573 |
Length | 278,942 |
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The map label for this gene is 117676229
Identifier: 117676229
GI number: 117676229
Start: 173365
End: 174261
Strand: Direct
Name: 117676229
Synonym: Shewana3_4290
Alternate gene names: NA
Gene position: 173365-174261 (Clockwise)
Preceding gene: 117676228
Following gene: 117676230
Centisome position: 62.15
GC content: 40.91
Gene sequence:
>897_bases ATGATATTAACCGTATTTGAAATATCGGTGTTGATATCTAAATGGGTTATCTATCTGAGTGTTGCCGCTGTTATTGGCGG CACATTGATGCAATACCTCATTAAGGGTCAACTTAATCTGAGCATTAGCGTTGCAAAATATACCGGCCTAGGTGCCGTAT TGGGATTGATTGCCGTTAGTATCAATTATTTTGCGCAAGTAGGGGCTTTTGCTGAAAACGGCTTGATGGGAATATTTGAT GCGCAGATGCATGCTTTTCTGTGGCCAACCCAGGTAGGGCAAACGGTGCTTTGGCGCTTAATCGGTTTTGGGTTAATGCT AGTGGCTAGTGGTTTACTGTTACATAAGAACCGTTATATCAAAACGTTTTCTGCGGTATTAGCGATTCTCAGTTGTCTGT TAATTGCTGTCACGTTTACTTTTATTGGCCATAGCACCGAACTGGGATTGCTTGCTCAAGGCTTAATATTGATACACGTG TTGATCATTGGCAGTTGGATAGGCGCTTTTTATCCATTATGGAAATTATGCTGCACCGATGACCACATCGTCATAAAAAA TGTCATGGATACATTTGGTCGTTTAGGCATAGTGATTGTCATTCTAGTGTTGCTTTCAGGCATGGGAATGGTGTGGATGT TGTTTGATAGTCCCACTGAATTAATCAGTTCCGATTATGGTATTGCGGTCACCATCAAGCTCTGTTTGGTGGCTATCATT TTGCTTATAGCAGCATGGCATAAATTGGTTTTAGTACCTAAATTAACGATTGCGAACACATTACTCGCAAAACAAAAACT ACAAAAATCGATTGGATTAGAAGCATTAATAGCAGTACTGATATTAGCGACAACAGCGGTACTTTCGAGCGTGCTAGGTC CTATGAGCCTTGGATAA
Upstream 100 bases:
>100_bases TGCTTCACGACTCTGGCATGAACACTCGCAGTGCACCGCCTATGACAATGGAGCATGAGACTAGCGAGCACACTGCACAT CAATAAGTGGATGAGTAAAC
Downstream 100 bases:
>100_bases TCACTATAAATTAACAGAGAGATAAAAATGAAAAATAGCCCTTTAACAATACTCATAACGACCGGGATATTACTGATGTC CGCAGGACAAAGCTCATTGA
Product: copper resistance D domain-containing protein
Products: NA
Alternate protein names: Copper Resistance D; Copper Resistance D Domain-Containing Protein; Copper Resistance D Domain Protein; Copper Resistance Protein D
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MILTVFEISVLISKWVIYLSVAAVIGGTLMQYLIKGQLNLSISVAKYTGLGAVLGLIAVSINYFAQVGAFAENGLMGIFD AQMHAFLWPTQVGQTVLWRLIGFGLMLVASGLLLHKNRYIKTFSAVLAILSCLLIAVTFTFIGHSTELGLLAQGLILIHV LIIGSWIGAFYPLWKLCCTDDHIVIKNVMDTFGRLGIVIVILVLLSGMGMVWMLFDSPTELISSDYGIAVTIKLCLVAII LLIAAWHKLVLVPKLTIANTLLAKQKLQKSIGLEALIAVLILATTAVLSSVLGPMSLG
Sequences:
>Translated_298_residues MILTVFEISVLISKWVIYLSVAAVIGGTLMQYLIKGQLNLSISVAKYTGLGAVLGLIAVSINYFAQVGAFAENGLMGIFD AQMHAFLWPTQVGQTVLWRLIGFGLMLVASGLLLHKNRYIKTFSAVLAILSCLLIAVTFTFIGHSTELGLLAQGLILIHV LIIGSWIGAFYPLWKLCCTDDHIVIKNVMDTFGRLGIVIVILVLLSGMGMVWMLFDSPTELISSDYGIAVTIKLCLVAII LLIAAWHKLVLVPKLTIANTLLAKQKLQKSIGLEALIAVLILATTAVLSSVLGPMSLG >Mature_298_residues MILTVFEISVLISKWVIYLSVAAVIGGTLMQYLIKGQLNLSISVAKYTGLGAVLGLIAVSINYFAQVGAFAENGLMGIFD AQMHAFLWPTQVGQTVLWRLIGFGLMLVASGLLLHKNRYIKTFSAVLAILSCLLIAVTFTFIGHSTELGLLAQGLILIHV LIIGSWIGAFYPLWKLCCTDDHIVIKNVMDTFGRLGIVIVILVLLSGMGMVWMLFDSPTELISSDYGIAVTIKLCLVAII LLIAAWHKLVLVPKLTIANTLLAKQKLQKSIGLEALIAVLILATTAVLSSVLGPMSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32124; Mature: 32124
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTVFEISVLISKWVIYLSVAAVIGGTLMQYLIKGQLNLSISVAKYTGLGAVLGLIAVS CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH INYFAQVGAFAENGLMGIFDAQMHAFLWPTQVGQTVLWRLIGFGLMLVASGLLLHKNRYI HHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTFSAVLAILSCLLIAVTFTFIGHSTELGLLAQGLILIHVLIIGSWIGAFYPLWKLCCTD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHIVIKNVMDTFGRLGIVIVILVLLSGMGMVWMLFDSPTELISSDYGIAVTIKLCLVAII CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHH LLIAAWHKLVLVPKLTIANTLLAKQKLQKSIGLEALIAVLILATTAVLSSVLGPMSLG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MILTVFEISVLISKWVIYLSVAAVIGGTLMQYLIKGQLNLSISVAKYTGLGAVLGLIAVS CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH INYFAQVGAFAENGLMGIFDAQMHAFLWPTQVGQTVLWRLIGFGLMLVASGLLLHKNRYI HHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTFSAVLAILSCLLIAVTFTFIGHSTELGLLAQGLILIHVLIIGSWIGAFYPLWKLCCTD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHIVIKNVMDTFGRLGIVIVILVLLSGMGMVWMLFDSPTELISSDYGIAVTIKLCLVAII CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHH LLIAAWHKLVLVPKLTIANTLLAKQKLQKSIGLEALIAVLILATTAVLSSVLGPMSLG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA