Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

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The map label for this gene is 117676212

Identifier: 117676212

GI number: 117676212

Start: 155350

End: 156240

Strand: Direct

Name: 117676212

Synonym: Shewana3_4273

Alternate gene names: NA

Gene position: 155350-156240 (Clockwise)

Preceding gene: 117676211

Following gene: 117676213

Centisome position: 55.69

GC content: 41.64

Gene sequence:

>891_bases
TTGAAGATATTTAGCCTATTAGTGGCAGCTTGTTTTAGTTCAGTCAGTATTGCCAATGCTGAAGAGATAACAGTTACAGA
GTCAGCAACCGATTTATGGGGTGTGAGTTATTTAAGTGGTAAACCAGTGGGCCGCAAAATGTCACTCAACAATTTCAAGG
CGGATCTAATTGACCGAGCGGCGAGAAAAGCAATTTACTCTAAATTAAACCCTACAGCACAACAGGGCGTATTGATCAGG
TCATCATCTAATGACGAATCGGTATTGCATGAGGTCGTTACTGCAAGTTCTTATATGTATTCTGTAAATAGTGTTGAATT
CGGCTATAACGTGTTGCCTGCAGGTATTGAGATTAAAGCAGATATAACCGTTAGCATTCGTCCTTATGACGAGTCCATGC
TGTTAAAACAGTTGGAAACGGATGTTCATCTATCGTCGCAGAATAGGCGCCACTGGACACCGATTGATGGACGCTATTTG
AAAGAAAAAGAAGATAGAATTTATGGCACTCCTAATAGTTTGTTTGTGATCACCGGCAATCATGAGAACACTATGCCCTC
CGACTATCAGTTTGTGTCTACTGAAACCTTTTTGGATTATTGGGTCATACGATACAAAGTCATGCTCGCTGACGCTTACG
GGCGCCGTGGGGTAAAGGGTTCCTTTTTAGGTACGGTAGATGATGTTAGCTCAAGGCCAGATAAGGTCTTTGATGCCGTA
CTGTCACATAAGCCTCAACAACAGATTAAATATCCTGACCAACAGATGATTAAAAGGATGGATGGAGCATTAATCTTAGT
TGGTAAAAAGGTCGTATCTGTCAACAATTTGAAAAATACGCAAGTACCCATAGGTATGAGCGGAACAATTCAGGCAATGC
CGTCGAAGTAG

Upstream 100 bases:

>100_bases
TTTTAAATTCGGCGGTTTTTACCGCCGTTTTTTTTGGGAAATTTGTTGTTTTTGAATAGTGATGTAGCATGGATGGAAAT
GTAGTGGTAGGGGAAAAATT

Downstream 100 bases:

>100_bases
GGATGGATTTTATATGCAAAAAATTAGTGCCGCGCTGCTAATAATTACTATGTTGTTAACTAATACAGATGTCATTGCGG
GTGAGTTTGATTATCGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRAARKAIYSKLNPTAQQGVLIR
SSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKADITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYL
KEKEDRIYGTPNSLFVITGNHENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV
LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK

Sequences:

>Translated_296_residues
MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRAARKAIYSKLNPTAQQGVLIR
SSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKADITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYL
KEKEDRIYGTPNSLFVITGNHENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV
LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK
>Mature_296_residues
MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRAARKAIYSKLNPTAQQGVLIR
SSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKADITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYL
KEKEDRIYGTPNSLFVITGNHENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV
LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33019; Mature: 33019

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRA
CHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHEEHCCCCCCCCCEECCCCHHHHHHHHH
ARKAIYSKLNPTAQQGVLIRSSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKA
HHHHHHHHCCCCHHCCEEEECCCCHHHHHHHHHHHHHHEEEECCEECCCEEECCCEEEEE
DITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYLKEKEDRIYGTPNSLFVITGN
EEEEEEECCCHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEEECC
HENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV
CCCCCCCCEEEEEHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCCCHHHHCCCHHHHHHHH
LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK
HCCCCHHHHCCCHHHHHHHHCCEEEEEECEEEEECCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRA
CHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHEEHCCCCCCCCCEECCCCHHHHHHHHH
ARKAIYSKLNPTAQQGVLIRSSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKA
HHHHHHHHCCCCHHCCEEEECCCCHHHHHHHHHHHHHHEEEECCEECCCEEECCCEEEEE
DITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYLKEKEDRIYGTPNSLFVITGN
EEEEEEECCCHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEEECC
HENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV
CCCCCCCCEEEEEHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCCCHHHHCCCHHHHHHHH
LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK
HCCCCHHHHCCCHHHHHHHHCCEEEEEECEEEEECCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA