Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621832
Identifier: 117621832
GI number: 117621832
Start: 27974
End: 28156
Strand: Reverse
Name: 117621832
Synonym: BAPKO_4532
Alternate gene names: NA
Gene position: 28156-27974 (Counterclockwise)
Preceding gene: 117621833
Following gene: 117621831
Centisome position: 98.68
GC content: 34.43
Gene sequence:
>183_bases ATGACTTGTAAAGAATGCATCAAAAAATTCGGAATAATCAATAATACATTAGCGGCGCGCTTTAAAAGTAGACAAAACGG GGGTACTTGTGTACGATGCAATAAGCTACCAACCAAAGACAACTTACAAACAACAACAACAACAAAACCAAAAGTAAAAG TATTGCCTGCAAAAAGTAATTAG
Upstream 100 bases:
>100_bases TACATCGCACTACATTATATTATATGGCAATATTTTTTTTAGTAAAAAGTTGAAATAGAAATATAATTATATATTATAAA GCGTAAAAGAGGGAAAAGTT
Downstream 100 bases:
>100_bases CGTAATGATAGAATAGATCAAGACGTTATTTAACTACAGTGAGCTACGGCGTTTTAATTTAACATGTTAAAAAATACTAA ATATTTAAAATGATTTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MTCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN
Sequences:
>Translated_60_residues MTCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN >Mature_59_residues TCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6641; Mature: 6510
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN CCHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCC >Mature Secondary Structure TCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN CHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA