Definition Borrelia afzelii PKo plasmid lp28, complete sequence.
Accession NC_008568
Length 28,533

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The map label for this gene is 117621832

Identifier: 117621832

GI number: 117621832

Start: 27974

End: 28156

Strand: Reverse

Name: 117621832

Synonym: BAPKO_4532

Alternate gene names: NA

Gene position: 28156-27974 (Counterclockwise)

Preceding gene: 117621833

Following gene: 117621831

Centisome position: 98.68

GC content: 34.43

Gene sequence:

>183_bases
ATGACTTGTAAAGAATGCATCAAAAAATTCGGAATAATCAATAATACATTAGCGGCGCGCTTTAAAAGTAGACAAAACGG
GGGTACTTGTGTACGATGCAATAAGCTACCAACCAAAGACAACTTACAAACAACAACAACAACAAAACCAAAAGTAAAAG
TATTGCCTGCAAAAAGTAATTAG

Upstream 100 bases:

>100_bases
TACATCGCACTACATTATATTATATGGCAATATTTTTTTTAGTAAAAAGTTGAAATAGAAATATAATTATATATTATAAA
GCGTAAAAGAGGGAAAAGTT

Downstream 100 bases:

>100_bases
CGTAATGATAGAATAGATCAAGACGTTATTTAACTACAGTGAGCTACGGCGTTTTAATTTAACATGTTAAAAAATACTAA
ATATTTAAAATGATTTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MTCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN

Sequences:

>Translated_60_residues
MTCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN
>Mature_59_residues
TCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6641; Mature: 6510

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN
CCHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCC
>Mature Secondary Structure 
TCKECIKKFGIINNTLAARFKSRQNGGTCVRCNKLPTKDNLQTTTTTKPKVKVLPAKSN
CHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA