Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621833
Identifier: 117621833
GI number: 117621833
Start: 28389
End: 28526
Strand: Reverse
Name: 117621833
Synonym: BAPKO_4533
Alternate gene names: NA
Gene position: 28526-28389 (Counterclockwise)
Preceding gene: NA
Following gene: 117621832
Centisome position: 99.98
GC content: 28.99
Gene sequence:
>138_bases TTGTACTTACGAAAAAAATTTTTCCCGAAAACAACACCATTGCACTTGATGTATGTATGTATAATAAATAACGGTATTAG TAATTATACGCCTGAATTTCGGTTTTCACACCACACTAGAAAATTTTCTAAATTTTAG
Upstream 100 bases:
>7_bases GTTGTCC
Downstream 100 bases:
>100_bases ATTTTATCAAACAAAAAAGAGAACAACCCTGATGTAAAAGGGTTGTTCTAATACCAAAACAATAGGATATTTTATGGTTT GCAAACAAATTTAGAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MYLRKKFFPKTTPLHLMYVCIINNGISNYTPEFRFSHHTRKFSKF
Sequences:
>Translated_45_residues MYLRKKFFPKTTPLHLMYVCIINNGISNYTPEFRFSHHTRKFSKF >Mature_45_residues MYLRKKFFPKTTPLHLMYVCIINNGISNYTPEFRFSHHTRKFSKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5541; Mature: 5541
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLRKKFFPKTTPLHLMYVCIINNGISNYTPEFRFSHHTRKFSKF CCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure MYLRKKFFPKTTPLHLMYVCIINNGISNYTPEFRFSHHTRKFSKF CCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA