Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 117621661

GI number: 117621661

Start: 14152

End: 14907

Strand: Direct

Name: soj [H]

Synonym: BAPKO_2514

Alternate gene names: 117621661

Gene position: 14152-14907 (Clockwise)

Preceding gene: 117621660

Following gene: 117621662

Centisome position: 23.66

GC content: 24.87

Gene sequence:

>756_bases
ATGGATATTAAAAAATCAGATATCATAACAATGGCTTCAATCAAGGGAGGAGTTGGAAAAAGTGCACTTTCTATACTTTT
TTCTTATGTTTTAAAAGAATTGGGGAAAAAAGTACTATTAATTGATTTGGATCCACAAAATTCTTTAACTTCCTATTTTA
ATAGGTATATTTCAAATATTGAAAAATACAATTCCTACAGCATGTTAAAAGGGGATTTCCATTTTAATGAATGCATTTAT
AAAATTGATGATTATATATCTATAATTCCCTCTCATCCCATTTTAGGAAAATTTAATTCAGAAGCCATTGATTATAAAGA
AATTATTTTAGAACATCATTTAAATGAAAATATTCAAAATTATAATTTTGATTATGTTTTATTAGATACTCCCCCCAGTT
TAGATTTTCTTTTAAAGAATGCCTTAAATGTTACGGATTATATTGTAATTCCAGTTCAGGTAGAAATATGGTCAATAGAA
AGTTTTACTATTTTGATTAATGCAGTTAATGATATTACAAAATTTAGGAAGAAAATATACAATATTTCTATTGTAGAGAA
CCAGTTTATAAAAAATAGAAAAACGATAAAAGAGGTGGAGGATTTGCTTTATAAAGAATATAAAGAATATATCAAGGGCA
AGATACATTTTTCAAATAGCATAAAAGTTCTTATAAACGGGCGGTTAGAACCCTCTACAAAAGAAATGTATCATAAAGAA
ATAAAAGATACTTTAAAAAATATTTTTTCTTTATAG

Upstream 100 bases:

>100_bases
CCGAGTACTATCAGTTTACGTTAAATCATTTAGAAAAAATGGAAAGCAAGGTATATAGGTTTTACAATAAAAAATTACCA
GACGGAGGAATTTTAAAAAA

Downstream 100 bases:

>100_bases
TTAACAAAAATGCTAGTTATAATATTACTTATCTAGAGTTGTCCGATATCGGACATGTAATTTAATCAAAAATTACCTAA
AAATAGGAGAGAAGAATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDIKKSDIITMASIKGGVGKSALSILFSYVLKELGKKVLLIDLDPQNSLTSYFNRYISNIEKYNSYSMLKGDFHFNECIY
KIDDYISIIPSHPILGKFNSEAIDYKEIILEHHLNENIQNYNFDYVLLDTPPSLDFLLKNALNVTDYIVIPVQVEIWSIE
SFTILINAVNDITKFRKKIYNISIVENQFIKNRKTIKEVEDLLYKEYKEYIKGKIHFSNSIKVLINGRLEPSTKEMYHKE
IKDTLKNIFSL

Sequences:

>Translated_251_residues
MDIKKSDIITMASIKGGVGKSALSILFSYVLKELGKKVLLIDLDPQNSLTSYFNRYISNIEKYNSYSMLKGDFHFNECIY
KIDDYISIIPSHPILGKFNSEAIDYKEIILEHHLNENIQNYNFDYVLLDTPPSLDFLLKNALNVTDYIVIPVQVEIWSIE
SFTILINAVNDITKFRKKIYNISIVENQFIKNRKTIKEVEDLLYKEYKEYIKGKIHFSNSIKVLINGRLEPSTKEMYHKE
IKDTLKNIFSL
>Mature_251_residues
MDIKKSDIITMASIKGGVGKSALSILFSYVLKELGKKVLLIDLDPQNSLTSYFNRYISNIEKYNSYSMLKGDFHFNECIY
KIDDYISIIPSHPILGKFNSEAIDYKEIILEHHLNENIQNYNFDYVLLDTPPSLDFLLKNALNVTDYIVIPVQVEIWSIE
SFTILINAVNDITKFRKKIYNISIVENQFIKNRKTIKEVEDLLYKEYKEYIKGKIHFSNSIKVLINGRLEPSTKEMYHKE
IKDTLKNIFSL

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29284; Mature: 29284

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKKSDIITMASIKGGVGKSALSILFSYVLKELGKKVLLIDLDPQNSLTSYFNRYISNI
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH
EKYNSYSMLKGDFHFNECIYKIDDYISIIPSHPILGKFNSEAIDYKEIILEHHLNENIQN
HHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
YNFDYVLLDTPPSLDFLLKNALNVTDYIVIPVQVEIWSIESFTILINAVNDITKFRKKIY
CCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEEEEEEEECEEEEEHHHHHHHHHHHHHHH
NISIVENQFIKNRKTIKEVEDLLYKEYKEYIKGKIHFSNSIKVLINGRLEPSTKEMYHKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHHHHH
IKDTLKNIFSL
HHHHHHHHHCC
>Mature Secondary Structure
MDIKKSDIITMASIKGGVGKSALSILFSYVLKELGKKVLLIDLDPQNSLTSYFNRYISNI
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH
EKYNSYSMLKGDFHFNECIYKIDDYISIIPSHPILGKFNSEAIDYKEIILEHHLNENIQN
HHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
YNFDYVLLDTPPSLDFLLKNALNVTDYIVIPVQVEIWSIESFTILINAVNDITKFRKKIY
CCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEEEEEEEECEEEEEHHHHHHHHHHHHHHH
NISIVENQFIKNRKTIKEVEDLLYKEYKEYIKGKIHFSNSIKVLINGRLEPSTKEMYHKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHHHHH
IKDTLKNIFSL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]