Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621660

Identifier: 117621660

GI number: 117621660

Start: 13613

End: 14179

Strand: Direct

Name: 117621660

Synonym: BAPKO_2513

Alternate gene names: NA

Gene position: 13613-14179 (Clockwise)

Preceding gene: 117621659

Following gene: 117621661

Centisome position: 22.76

GC content: 23.46

Gene sequence:

>567_bases
TTGAGTAGATTACTTGAAAAACTAAAACAAAAAAAGGCTTTGATAAAGATTAGCAACATTTCAATTAAAAAAGATACCTT
TAGTAAAATAGAAGAAATAGACGGCAAAAAAGTATACTACACAAAAATATTTAAACATTTAATTGGCTTCAGAGTTACTA
ACAAAGGACAAAGACTTAGACTTGTTTTTCAAGAATTTAATAATCTTAATAAAGATTATTACTTTTTTAACCTTTTTGCA
TTAGAAGAAAATGATAAATTTTTAGGAATAAAATATGGATGGGATCGTCTTAAAAACCCTTTATTTCTTAAAAAAGAAAA
TAATAAAATTTATGCAATAAAAAAACTATATTACATAGAGTTTAGGTTTAAAAAAGGATCTATTAAGTCCTATATATTGT
CTTTAAGAACTTTGTTAAGAAAAAAAGAAAAAGAAGCCACCGAGTACTATCAGTTTACGTTAAATCATTTAGAAAAAATG
GAAAGCAAGGTATATAGGTTTTACAATAAAAAATTACCAGACGGAGGAATTTTAAAAAAATGGATATTAAAAAATCAGAT
ATCATAA

Upstream 100 bases:

>100_bases
GTTACTAAATGGAAAGAAAATAAAATAAATAACTTTTCAGGACATGCAAGTATAATAGCTAATAATATTTTAACCAATAT
TTTGACAAAAGGATTAAAAT

Downstream 100 bases:

>100_bases
CAATGGCTTCAATCAAGGGAGGAGTTGGAAAAAGTGCACTTTCTATACTTTTTTCTTATGTTTTAAAAGAATTGGGGAAA
AAAGTACTATTAATTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSRLLEKLKQKKALIKISNISIKKDTFSKIEEIDGKKVYYTKIFKHLIGFRVTNKGQRLRLVFQEFNNLNKDYYFFNLFA
LEENDKFLGIKYGWDRLKNPLFLKKENNKIYAIKKLYYIEFRFKKGSIKSYILSLRTLLRKKEKEATEYYQFTLNHLEKM
ESKVYRFYNKKLPDGGILKKWILKNQIS

Sequences:

>Translated_188_residues
MSRLLEKLKQKKALIKISNISIKKDTFSKIEEIDGKKVYYTKIFKHLIGFRVTNKGQRLRLVFQEFNNLNKDYYFFNLFA
LEENDKFLGIKYGWDRLKNPLFLKKENNKIYAIKKLYYIEFRFKKGSIKSYILSLRTLLRKKEKEATEYYQFTLNHLEKM
ESKVYRFYNKKLPDGGILKKWILKNQIS
>Mature_187_residues
SRLLEKLKQKKALIKISNISIKKDTFSKIEEIDGKKVYYTKIFKHLIGFRVTNKGQRLRLVFQEFNNLNKDYYFFNLFAL
EENDKFLGIKYGWDRLKNPLFLKKENNKIYAIKKLYYIEFRFKKGSIKSYILSLRTLLRKKEKEATEYYQFTLNHLEKME
SKVYRFYNKKLPDGGILKKWILKNQIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22855; Mature: 22724

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLEKLKQKKALIKISNISIKKDTFSKIEEIDGKKVYYTKIFKHLIGFRVTNKGQRLR
CHHHHHHHHHHHHEEEEECCEECHHHHHHHHHCCCCEEHHHHHHHHHHCEEECCCCCHHH
LVFQEFNNLNKDYYFFNLFALEENDKFLGIKYGWDRLKNPLFLKKENNKIYAIKKLYYIE
HHHHHHCCCCCCEEEEEEEEEECCCCEEEEEECHHHHCCCEEEEECCCEEEEEEEEEEEE
FRFKKGSIKSYILSLRTLLRKKEKEATEYYQFTLNHLEKMESKVYRFYNKKLPDGGILKK
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
WILKNQIS
HHHHHCCC
>Mature Secondary Structure 
SRLLEKLKQKKALIKISNISIKKDTFSKIEEIDGKKVYYTKIFKHLIGFRVTNKGQRLR
HHHHHHHHHHHHEEEEECCEECHHHHHHHHHCCCCEEHHHHHHHHHHCEEECCCCCHHH
LVFQEFNNLNKDYYFFNLFALEENDKFLGIKYGWDRLKNPLFLKKENNKIYAIKKLYYIE
HHHHHHCCCCCCEEEEEEEEEECCCCEEEEEECHHHHCCCEEEEECCCEEEEEEEEEEEE
FRFKKGSIKSYILSLRTLLRKKEKEATEYYQFTLNHLEKMESKVYRFYNKKLPDGGILKK
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
WILKNQIS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA