Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
---|---|
Accession | NC_008565 |
Length | 59,804 |
Click here to switch to the map view.
The map label for this gene is 117621662
Identifier: 117621662
GI number: 117621662
Start: 15003
End: 15632
Strand: Direct
Name: 117621662
Synonym: BAPKO_2515
Alternate gene names: NA
Gene position: 15003-15632 (Clockwise)
Preceding gene: 117621661
Following gene: 117621663
Centisome position: 25.09
GC content: 22.06
Gene sequence:
>630_bases ATGGGGAAAAAAGAAAATAAAAAGCAAGTAACTTTATATAAAAGAGTTGAAATTCCTACAGGAGAAGAATTAAATTTAGA TAATAATCAAGATGAAGAATTGATAAATTACAATAAACTAAAGGAGCAGTTGAAATTAAATTTGAAATCCGATATTAATA ATAAAATTCAAAGAATGAGGATTCTATATGAAATTAAACAAAAAGAACTTTATAAATATGATGGTTTTAAAAGTTTTAAA CAGTTTATAAGGTCTTATGTAATTGCTAGAAGCCAAGCATATATGTATTTGAAAATTTATGAGAAAGTTTTAGAAGGGAC TATTTCGATTGAAAAAGTTAAAGAAATAGGTTTTGTAGCTACATATAAAAATATATTAAAGAACAATTCTTTATATGTAT ATAAAGAAAATATGATTAAAGAAAATGCAGAAGAAGATGATAATAGTCAAAATATACCTATTCGAATTTTAATGAAAGAT AAAGAAGTTTATGATTTTTGCAAAAAAGATACCAAAAGAATATATTTTATTCTAGAGAGGCTGATTAAAGATAAAAAAAA TATCTTGTCAGATCTTATTATTGATTATGAAAATCATAGAAAAGATAAAAAGAAAAAAGTTAACTCTTGA
Upstream 100 bases:
>100_bases TATAGTTAACAAAAATGCTAGTTATAATATTACTTATCTAGAGTTGTCCGATATCGGACATGTAATTTAATCAAAAATTA CCTAAAAATAGGAGAGAAGA
Downstream 100 bases:
>100_bases TTATTATTATATAATATACTATTATCAAATTAGGTTAGAGAACTTTTCTCTCTCCGTTTTCAGTAGTAAAATATTTGCCC ATAGGGGCTTTTTTTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: PF49 Plasmid Partition Protein; PF-49 Plasmid Partition Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMRILYEIKQKELYKYDGFKSFK QFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVATYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKD KEVYDFCKKDTKRIYFILERLIKDKKNILSDLIIDYENHRKDKKKKVNS
Sequences:
>Translated_209_residues MGKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMRILYEIKQKELYKYDGFKSFK QFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVATYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKD KEVYDFCKKDTKRIYFILERLIKDKKNILSDLIIDYENHRKDKKKKVNS >Mature_208_residues GKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMRILYEIKQKELYKYDGFKSFKQ FIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVATYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKDK EVYDFCKKDTKRIYFILERLIKDKKNILSDLIIDYENHRKDKKKKVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25235; Mature: 25103
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMR CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILYEIKQKELYKYDGFKSFKQFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKDKEVYDFCKKDTKRIYFILER HHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH LIKDKKNILSDLIIDYENHRKDKKKKVNS HHHHHHHHHHHHHHCCHHCCHHHHHCCCC >Mature Secondary Structure GKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMR CCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILYEIKQKELYKYDGFKSFKQFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKDKEVYDFCKKDTKRIYFILER HHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH LIKDKKNILSDLIIDYENHRKDKKKKVNS HHHHHHHHHHHHHHCCHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA