Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621662

Identifier: 117621662

GI number: 117621662

Start: 15003

End: 15632

Strand: Direct

Name: 117621662

Synonym: BAPKO_2515

Alternate gene names: NA

Gene position: 15003-15632 (Clockwise)

Preceding gene: 117621661

Following gene: 117621663

Centisome position: 25.09

GC content: 22.06

Gene sequence:

>630_bases
ATGGGGAAAAAAGAAAATAAAAAGCAAGTAACTTTATATAAAAGAGTTGAAATTCCTACAGGAGAAGAATTAAATTTAGA
TAATAATCAAGATGAAGAATTGATAAATTACAATAAACTAAAGGAGCAGTTGAAATTAAATTTGAAATCCGATATTAATA
ATAAAATTCAAAGAATGAGGATTCTATATGAAATTAAACAAAAAGAACTTTATAAATATGATGGTTTTAAAAGTTTTAAA
CAGTTTATAAGGTCTTATGTAATTGCTAGAAGCCAAGCATATATGTATTTGAAAATTTATGAGAAAGTTTTAGAAGGGAC
TATTTCGATTGAAAAAGTTAAAGAAATAGGTTTTGTAGCTACATATAAAAATATATTAAAGAACAATTCTTTATATGTAT
ATAAAGAAAATATGATTAAAGAAAATGCAGAAGAAGATGATAATAGTCAAAATATACCTATTCGAATTTTAATGAAAGAT
AAAGAAGTTTATGATTTTTGCAAAAAAGATACCAAAAGAATATATTTTATTCTAGAGAGGCTGATTAAAGATAAAAAAAA
TATCTTGTCAGATCTTATTATTGATTATGAAAATCATAGAAAAGATAAAAAGAAAAAAGTTAACTCTTGA

Upstream 100 bases:

>100_bases
TATAGTTAACAAAAATGCTAGTTATAATATTACTTATCTAGAGTTGTCCGATATCGGACATGTAATTTAATCAAAAATTA
CCTAAAAATAGGAGAGAAGA

Downstream 100 bases:

>100_bases
TTATTATTATATAATATACTATTATCAAATTAGGTTAGAGAACTTTTCTCTCTCCGTTTTCAGTAGTAAAATATTTGCCC
ATAGGGGCTTTTTTTGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: PF49 Plasmid Partition Protein; PF-49 Plasmid Partition Protein

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMRILYEIKQKELYKYDGFKSFK
QFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVATYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKD
KEVYDFCKKDTKRIYFILERLIKDKKNILSDLIIDYENHRKDKKKKVNS

Sequences:

>Translated_209_residues
MGKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMRILYEIKQKELYKYDGFKSFK
QFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVATYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKD
KEVYDFCKKDTKRIYFILERLIKDKKNILSDLIIDYENHRKDKKKKVNS
>Mature_208_residues
GKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMRILYEIKQKELYKYDGFKSFKQ
FIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVATYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKDK
EVYDFCKKDTKRIYFILERLIKDKKNILSDLIIDYENHRKDKKKKVNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25235; Mature: 25103

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMR
CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILYEIKQKELYKYDGFKSFKQFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKDKEVYDFCKKDTKRIYFILER
HHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LIKDKKNILSDLIIDYENHRKDKKKKVNS
HHHHHHHHHHHHHHCCHHCCHHHHHCCCC
>Mature Secondary Structure 
GKKENKKQVTLYKRVEIPTGEELNLDNNQDEELINYNKLKEQLKLNLKSDINNKIQRMR
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILYEIKQKELYKYDGFKSFKQFIRSYVIARSQAYMYLKIYEKVLEGTISIEKVKEIGFVA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TYKNILKNNSLYVYKENMIKENAEEDDNSQNIPIRILMKDKEVYDFCKKDTKRIYFILER
HHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LIKDKKNILSDLIIDYENHRKDKKKKVNS
HHHHHHHHHHHHHHCCHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA