Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

Click here to switch to the map view.

The map label for this gene is 117621659

Identifier: 117621659

GI number: 117621659

Start: 12703

End: 13620

Strand: Direct

Name: 117621659

Synonym: BAPKO_2512

Alternate gene names: NA

Gene position: 12703-13620 (Clockwise)

Preceding gene: 117621654

Following gene: 117621660

Centisome position: 21.24

GC content: 22.55

Gene sequence:

>918_bases
ATGAAATCAGTTATATCTAGCCATGACCACCAAACCTATAAAAACAAACTACTTAGTAAAGTCTGCAGACTGAAAAAAAT
TATTTCGGTTATTATTTACTTAAATAAAGAGTTTGAAAAAAAACACAGCATCTTAATTAATAAAGAACACTTTACTTACG
AAAAAGTAAAAGAGCTTCGAGTTCATCATCAAGGAGATATACTTCGCGTACTAAACTCAAATATACATAAAGAAAATAAA
AAAGAAACCACAATTAATACTCTAAGAATAGATTTAAGATTTTTAGTTAAACTGAAAGCATTAGAAAAAAGAATACTAAC
ATTTTCAAATAACTTTGGAGAATTTAAAGGAAAGCTTTGTATATATAAAGTATCACCCATTGCACATAAATTGATTGATG
TATATTTTAGCAGCACTAAATCAGACTTAATTAAGAAAGTAAAAGAAGAAAAAGATGATTTAGCAGAAAAAAAAGGATAT
TTCAAAACTGAAAATATCACTGAAAATATCACTGTATATAATAAACAATATATAAATATATATAATAAGAATTCTATAGA
AAAATCTTTCTTTAAAAGAATTAAATCAATAACTTCTAAAACTAAAAATCCAATTAAAACACTAAAAAATACTTTATTAA
ACTATAAAGATTTTAAAAATTATCTAAAATATGATTATGAGGTAAAAGATATTAAAGAATTTTTTTTATCTAAACTAAAT
CTTTATAAACATAAAATTCATTTTATGAGAAAAACTGCACCTTATAAAACCGATTTCTACATTATTGCAGGAGAATTTAA
AGACACTTATGTTACTAAATGGAAAGAAAATAAAATAAATAACTTTTCAGGACATGCAAGTATAATAGCTAATAATATTT
TAACCAATATTTTGACAAAAGGATTAAAATTTGAGTAG

Upstream 100 bases:

>100_bases
TGATTTAAAAAAATCATACTTCATAGGTTGAAATTAATCAAATATTTTGATTATAATAAAGTTATTGCTAATAAAAATAC
ACTGAAAATGGAGATTAAAA

Downstream 100 bases:

>100_bases
ATTACTTGAAAAACTAAAACAAAAAAAGGCTTTGATAAAGATTAGCAACATTTCAATTAAAAAAGATACCTTTAGTAAAA
TAGAAGAAATAGACGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELRVHHQGDILRVLNSNIHKENK
KETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLCIYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGY
FKTENITENITVYNKQYINIYNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN
LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTKGLKFE

Sequences:

>Translated_305_residues
MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELRVHHQGDILRVLNSNIHKENK
KETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLCIYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGY
FKTENITENITVYNKQYINIYNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN
LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTKGLKFE
>Mature_305_residues
MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELRVHHQGDILRVLNSNIHKENK
KETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLCIYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGY
FKTENITENITVYNKQYINIYNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN
LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTKGLKFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36275; Mature: 36275

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHH
VHHQGDILRVLNSNIHKENKKETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLC
HHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
IYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGYFKTENITENITVYNKQYINI
EEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECEEEEEE
YNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN
ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH
LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTK
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GLKFE
CCCCC
>Mature Secondary Structure
MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHH
VHHQGDILRVLNSNIHKENKKETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLC
HHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
IYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGYFKTENITENITVYNKQYINI
EEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECEEEEEE
YNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN
ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH
LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTK
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GLKFE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA