Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621659
Identifier: 117621659
GI number: 117621659
Start: 12703
End: 13620
Strand: Direct
Name: 117621659
Synonym: BAPKO_2512
Alternate gene names: NA
Gene position: 12703-13620 (Clockwise)
Preceding gene: 117621654
Following gene: 117621660
Centisome position: 21.24
GC content: 22.55
Gene sequence:
>918_bases ATGAAATCAGTTATATCTAGCCATGACCACCAAACCTATAAAAACAAACTACTTAGTAAAGTCTGCAGACTGAAAAAAAT TATTTCGGTTATTATTTACTTAAATAAAGAGTTTGAAAAAAAACACAGCATCTTAATTAATAAAGAACACTTTACTTACG AAAAAGTAAAAGAGCTTCGAGTTCATCATCAAGGAGATATACTTCGCGTACTAAACTCAAATATACATAAAGAAAATAAA AAAGAAACCACAATTAATACTCTAAGAATAGATTTAAGATTTTTAGTTAAACTGAAAGCATTAGAAAAAAGAATACTAAC ATTTTCAAATAACTTTGGAGAATTTAAAGGAAAGCTTTGTATATATAAAGTATCACCCATTGCACATAAATTGATTGATG TATATTTTAGCAGCACTAAATCAGACTTAATTAAGAAAGTAAAAGAAGAAAAAGATGATTTAGCAGAAAAAAAAGGATAT TTCAAAACTGAAAATATCACTGAAAATATCACTGTATATAATAAACAATATATAAATATATATAATAAGAATTCTATAGA AAAATCTTTCTTTAAAAGAATTAAATCAATAACTTCTAAAACTAAAAATCCAATTAAAACACTAAAAAATACTTTATTAA ACTATAAAGATTTTAAAAATTATCTAAAATATGATTATGAGGTAAAAGATATTAAAGAATTTTTTTTATCTAAACTAAAT CTTTATAAACATAAAATTCATTTTATGAGAAAAACTGCACCTTATAAAACCGATTTCTACATTATTGCAGGAGAATTTAA AGACACTTATGTTACTAAATGGAAAGAAAATAAAATAAATAACTTTTCAGGACATGCAAGTATAATAGCTAATAATATTT TAACCAATATTTTGACAAAAGGATTAAAATTTGAGTAG
Upstream 100 bases:
>100_bases TGATTTAAAAAAATCATACTTCATAGGTTGAAATTAATCAAATATTTTGATTATAATAAAGTTATTGCTAATAAAAATAC ACTGAAAATGGAGATTAAAA
Downstream 100 bases:
>100_bases ATTACTTGAAAAACTAAAACAAAAAAAGGCTTTGATAAAGATTAGCAACATTTCAATTAAAAAAGATACCTTTAGTAAAA TAGAAGAAATAGACGGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELRVHHQGDILRVLNSNIHKENK KETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLCIYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGY FKTENITENITVYNKQYINIYNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTKGLKFE
Sequences:
>Translated_305_residues MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELRVHHQGDILRVLNSNIHKENK KETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLCIYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGY FKTENITENITVYNKQYINIYNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTKGLKFE >Mature_305_residues MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELRVHHQGDILRVLNSNIHKENK KETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLCIYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGY FKTENITENITVYNKQYINIYNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTKGLKFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36275; Mature: 36275
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHH VHHQGDILRVLNSNIHKENKKETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLC HHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE IYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGYFKTENITENITVYNKQYINI EEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECEEEEEE YNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTK HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GLKFE CCCCC >Mature Secondary Structure MKSVISSHDHQTYKNKLLSKVCRLKKIISVIIYLNKEFEKKHSILINKEHFTYEKVKELR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHH VHHQGDILRVLNSNIHKENKKETTINTLRIDLRFLVKLKALEKRILTFSNNFGEFKGKLC HHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE IYKVSPIAHKLIDVYFSSTKSDLIKKVKEEKDDLAEKKGYFKTENITENITVYNKQYINI EEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECEEEEEE YNKNSIEKSFFKRIKSITSKTKNPIKTLKNTLLNYKDFKNYLKYDYEVKDIKEFFLSKLN ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHH LYKHKIHFMRKTAPYKTDFYIIAGEFKDTYVTKWKENKINNFSGHASIIANNILTNILTK HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GLKFE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA