Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621653

Identifier: 117621653

GI number: 117621653

Start: 4400

End: 5080

Strand: Direct

Name: 117621653

Synonym: BAPKO_2506

Alternate gene names: NA

Gene position: 4400-5080 (Clockwise)

Preceding gene: 117621652

Following gene: 117621654

Centisome position: 7.36

GC content: 18.06

Gene sequence:

>681_bases
TTGTTAATATATCTAATATCCTCTTTAATTACAATTTTTTTCATACCAAATGATAAAAATACAGATCATAAGCACAATAA
AGAAGATTTAACTTTATATCTTATAAAGTTTTTTAAAAAAATAATAATATTATTGAAATCTAAAGAGCTTTTAGCAGTAT
TTATTCTAAATAGCTCTATTCAATTTTTTTATCAACCTTTTTATTTATACTGGCAAGCAATTTTTATTGATAAAAATATA
TCTATTAGCATATTTGGAATCATATATGTACTATTTCGCGTATCAGATATTATAGGAGCATGGATATTTAGAAAAATTAA
ACATTCAAAATATGATATTTATGTTATTTTAGCTATAATATTTTTATTATCAGTTTTAATAAAAATAGTTTTACATATTT
ACATATTTATTACTATAATCATATTTTTAGTAATTTTAATTTCTGTTTATTCTAATAATTTAGAATATTTTTTAAAAAAA
AATGTGGATTCAAAAGTTTTAGGAACCTTAACTTCTATTAATAGTACATTATCTCGTATATTTTCATTTTTAGCACTAGG
CATATGTTCAATTTTAACTAATTTTATAAGTGCTATATATACATTTGTTTTATTAATACTTATTTTTTGTACATTATCCA
TTATTGTAACATATAAATTTAAAAATAATAAAAAAAGTTGA

Upstream 100 bases:

>100_bases
ATCATTTGTAAAAATGATATAAAGTATTGGTGCTATTTTAGGTGGATATATTGGAAGTGTACTATATTTATATATTGATA
TAAAAATTTACCTAATTTCA

Downstream 100 bases:

>100_bases
GAAATAGATATTATTAATATCCTTCTTATGGAAAAGACATTAAAATACTCGTGTAAGGTTATTAAATTCTTTTATTTCTT
TTTCATGCTCACAATATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSIQFFYQPFYLYWQAIFIDKNI
SISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAIIFLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKK
NVDSKVLGTLTSINSTLSRIFSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS

Sequences:

>Translated_226_residues
MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSIQFFYQPFYLYWQAIFIDKNI
SISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAIIFLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKK
NVDSKVLGTLTSINSTLSRIFSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS
>Mature_226_residues
MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSIQFFYQPFYLYWQAIFIDKNI
SISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAIIFLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKK
NVDSKVLGTLTSINSTLSRIFSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26420; Mature: 26420

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSI
CHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
QFFYQPFYLYWQAIFIDKNISISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAII
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKKNVDSKVLGTLTSINSTLSRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
FSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSI
CHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH
QFFYQPFYLYWQAIFIDKNISISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAII
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKKNVDSKVLGTLTSINSTLSRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
FSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA