Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621651

Identifier: 117621651

GI number: 117621651

Start: 2513

End: 3337

Strand: Direct

Name: 117621651

Synonym: BAPKO_2504

Alternate gene names: NA

Gene position: 2513-3337 (Clockwise)

Preceding gene: 117621650

Following gene: 117621652

Centisome position: 4.2

GC content: 25.33

Gene sequence:

>825_bases
ATGAAATATAATATAATTGTAAGCATATTTGTTTTTTTATTTTTAAATGCTTGCAATCCAGATTTTAAAACCAATCAAAA
AGATATGAAGGATCAATCTAGTAAAAAAGAACTAAAATCCAATAAAGAGGGATTAAAAACCAAAACAACAGTAACCCCAA
ATCAAGAAGCAAACCCAAATCAAGAAAAAACCTCTAATAAAAGAATAAAAAACACACCTCTTGACGATCTAAGAAATTTA
ATAGAAACAGCTAATATCGATAGACAAAAATATGTAAAAAAATTGGAAGAAGAACCTTCAGACCAATATGGAATATTGGC
TTTCAAAAAATTAGTTTGGGTGGGAAATTTATCCAGTGAAAAGATAGCTGATAATAGCGATAAATCTAAAAGATATAGAA
AATATATTTATGCCACTTTAAATGCTATTGACACTAATAAATTAAAGGAATTTTCAGAAATTATAATATTATCGGGACAA
ACACAAAGCCTATTTAGCATCTTTAACGAATTTGGAAGTGCTATTGACGACGTGATTGTTTATCTATATTCTAAAAAAGA
CACTATAAATAAACTAGACACTTTAGACTTAGAGAAGCTTAAAAATTCATTTGAGAAATTATTATCTACAAAAACAATCG
TTTCAGAAATGTTAAACCAACTTTTATTAGATTATCAAAATAATAAAAATCTTATAAAAACAAATTTTACTAAACTCAAA
TCTTATGTAATTGAACTTTACAAACAACTTGTAAAAAAAAGGGAAGAATCTGAAAATCTAAAAAACGACATAATTTCAAT
ATATACCTTAAAGGTTATGTATTGA

Upstream 100 bases:

>100_bases
TGATTATTATCTCATATATATTTATTATAATCTAATTATATTAGATTGAATATTATATTATATTAAATATAATATAATAT
TTTAAATAAGGAGAATATTT

Downstream 100 bases:

>100_bases
AATTGTCATAATGTAAAAGCCTATCTTCAATAAAAGATAGGCTTAATGTTTTAACTAAAAATTGCAAAGAATTTTCCATC
TATAATTTACATAAACTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Virulent Strain Associated Lipoprotein; Antigen P; Borrelia Virulent Strain Associated Lipoprotein; Surface Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKYNIIVSIFVFLFLNACNPDFKTNQKDMKDQSSKKELKSNKEGLKTKTTVTPNQEANPNQEKTSNKRIKNTPLDDLRNL
IETANIDRQKYVKKLEEEPSDQYGILAFKKLVWVGNLSSEKIADNSDKSKRYRKYIYATLNAIDTNKLKEFSEIIILSGQ
TQSLFSIFNEFGSAIDDVIVYLYSKKDTINKLDTLDLEKLKNSFEKLLSTKTIVSEMLNQLLLDYQNNKNLIKTNFTKLK
SYVIELYKQLVKKREESENLKNDIISIYTLKVMY

Sequences:

>Translated_274_residues
MKYNIIVSIFVFLFLNACNPDFKTNQKDMKDQSSKKELKSNKEGLKTKTTVTPNQEANPNQEKTSNKRIKNTPLDDLRNL
IETANIDRQKYVKKLEEEPSDQYGILAFKKLVWVGNLSSEKIADNSDKSKRYRKYIYATLNAIDTNKLKEFSEIIILSGQ
TQSLFSIFNEFGSAIDDVIVYLYSKKDTINKLDTLDLEKLKNSFEKLLSTKTIVSEMLNQLLLDYQNNKNLIKTNFTKLK
SYVIELYKQLVKKREESENLKNDIISIYTLKVMY
>Mature_274_residues
MKYNIIVSIFVFLFLNACNPDFKTNQKDMKDQSSKKELKSNKEGLKTKTTVTPNQEANPNQEKTSNKRIKNTPLDDLRNL
IETANIDRQKYVKKLEEEPSDQYGILAFKKLVWVGNLSSEKIADNSDKSKRYRKYIYATLNAIDTNKLKEFSEIIILSGQ
TQSLFSIFNEFGSAIDDVIVYLYSKKDTINKLDTLDLEKLKNSFEKLLSTKTIVSEMLNQLLLDYQNNKNLIKTNFTKLK
SYVIELYKQLVKKREESENLKNDIISIYTLKVMY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31911; Mature: 31911

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA