Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is marR [C]
Identifier: 116689947
GI number: 116689947
Start: 2142133
End: 2142582
Strand: Direct
Name: marR [C]
Synonym: Bcen2424_1926
Alternate gene names: 116689947
Gene position: 2142133-2142582 (Clockwise)
Preceding gene: 116689946
Following gene: 116689950
Centisome position: 61.49
GC content: 66.0
Gene sequence:
>450_bases ATGAAAGGCCGTCAAGCCGGGCTCGATCAGTTTCTAACCTATCGCCTCCATGCGCTCACGAAGCGCTCCGACCGCGGGAT CGGCGAGGTGTACCGGCACAAGCTCGACATCTCGCTGCCCGAGGCGCGCGTGATCGCCGCCGTCGGCGCATTCGGCCCGT TCTCGATCATGGATCTCGCGCGCCATACCAATCTCGACAAAAGTCAGGCCAGTCGCGCAGCCGAAGCGCTGCTGCGCCAG GGGCTGCTCGAGCGCAGCGCGAGCGACGAAGACGGCCGGATCGTGCTGATCGCACTGACCACCGACGGCCGCGCGCTGCA TCGCAAGATCATGCCGATCGTGCGCAAGTGGAACGACGGCTTGCTCGCGTGCCTGTCCGACAGCGAACGCCAGACGTTCG AGCGGCTGCTCGACAAGGTGGTCGCGCACGCAACCGAGCGCGACGACTGA
Upstream 100 bases:
>100_bases CAGAACAGTTGACACGCCTGAAGTACGGTGCACACTGACCGTTGACCCGAGCGCGCGATACAGGAACAATCGGGCCCGCC CTTTTTCTTCAGGATTCGAC
Downstream 100 bases:
>100_bases GCCGCGCGTCGGCCCCGGCATCGCCGGACGGCCGAGTGTCGCGGGCAGCATTGATCCGACGAATCAGACGGGTCGCCCGA GTCGCGTCACGCGCGATTCG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; Transcriptional Regulator MarR Family Protein; Transcription Regulator Protein; Transcriptional Regulator MarR/EmrR Family Protein; Transcription Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator Marr Family Protein; Transcriptional Regulatory Protein; MarR Family Regulatory Helix-Turn-Helix; Transcriptional Regulator MarR/EmrR Family
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKGRQAGLDQFLTYRLHALTKRSDRGIGEVYRHKLDISLPEARVIAAVGAFGPFSIMDLARHTNLDKSQASRAAEALLRQ GLLERSASDEDGRIVLIALTTDGRALHRKIMPIVRKWNDGLLACLSDSERQTFERLLDKVVAHATERDD
Sequences:
>Translated_149_residues MKGRQAGLDQFLTYRLHALTKRSDRGIGEVYRHKLDISLPEARVIAAVGAFGPFSIMDLARHTNLDKSQASRAAEALLRQ GLLERSASDEDGRIVLIALTTDGRALHRKIMPIVRKWNDGLLACLSDSERQTFERLLDKVVAHATERDD >Mature_149_residues MKGRQAGLDQFLTYRLHALTKRSDRGIGEVYRHKLDISLPEARVIAAVGAFGPFSIMDLARHTNLDKSQASRAAEALLRQ GLLERSASDEDGRIVLIALTTDGRALHRKIMPIVRKWNDGLLACLSDSERQTFERLLDKVVAHATERDD
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16676; Mature: 16676
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRQAGLDQFLTYRLHALTKRSDRGIGEVYRHKLDISLPEARVIAAVGAFGPFSIMDLA CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH RHTNLDKSQASRAAEALLRQGLLERSASDEDGRIVLIALTTDGRALHRKIMPIVRKWNDG HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC LLACLSDSERQTFERLLDKVVAHATERDD EEEECCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKGRQAGLDQFLTYRLHALTKRSDRGIGEVYRHKLDISLPEARVIAAVGAFGPFSIMDLA CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH RHTNLDKSQASRAAEALLRQGLLERSASDEDGRIVLIALTTDGRALHRKIMPIVRKWNDG HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC LLACLSDSERQTFERLLDKVVAHATERDD EEEECCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA