Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is glxK [H]
Identifier: 116689946
GI number: 116689946
Start: 2140925
End: 2142070
Strand: Direct
Name: glxK [H]
Synonym: Bcen2424_1925
Alternate gene names: 116689946
Gene position: 2140925-2142070 (Clockwise)
Preceding gene: 116689940
Following gene: 116689947
Centisome position: 61.45
GC content: 73.82
Gene sequence:
>1146_bases ATGCCGCACCACCCGTCCGCGCCTGTCGTCGTCATCGCGCCCGATTCGTTCAAAGGCTCGCTTTCCGCCGAGCAGGTCGC GGACGCGATCGCCACCGGCATTCGCCGCGCCCGGCCCGACGCGGTCGTGCGGTGCTGCCCGATGGCGGACGGCGGCGAAG GCACGCTCGACGCGATGCTGGCGGGCGGCGGCACGCGGCGCACGTTGCGGGTGGCCGGCGCGTCGCTGGCGGCACGCGAT GCGGCGGTCGGCGTGATCGATGCGCGCACCGCGATCGTCGAGACGGCCGAGATCGTCGGGATTACCGACCCGGTCGGCAT GAGCGTGCCGGTCGACGCGCGCAGCACGCGCGGGATGGGCGAGGCGATCCGCGCGCTGCTCGACGACGGCGTGCGCCGCT TCTTCGTCGCGCTCGGCGGCAGCAGCACCAACGACGCCGGTGCCGGGCTGCTCGCGGGCCTCGGCCTGCAGTGCTTCGAC GCCGACGGCCAGCCGGTCGAGCCGGTGCCGTCGCGGCTCGCCGACATCGCGCGCATCGACGCGTCGGGGCTCGACCCGCG CCTGAAGGAAACGGAATTCGTCGGCATGTCCGACGTCGACAATCCGCTGACGGGCGCGCATGGCGCGACCGCCGTGTTCG GCCCGCAAAAGGGCGTGACGGCCGCACAGGTCGCGACGCTCGATGCGGCCCTCGCCCGCTTCGCCGACCTGCTCGAAGCC GCACTCGACCGCCGCGGCCGCGAGCTGCCGGGCGCAGGCGCCGCCGGCGGCCTCGGTTTCGCGCTGCACATGCTCGGCGC ACGCTTCGAGGCCGGTGCCGAAGTAGTGGCGCGCCAGGTCGGGCTCGACGCCGCACTGGCCGGCGCCGAGTGGCTGATCA CCGGCGAAGGCCGCTCGGACGTGCAGACGCTGCACGGCAAGGCGCCGTTCATCGCCTGCCGGCACGCGCGGGCCGCCGGT GTGAGCGCGTCGCTGCTGTCCGGCGCGATCGACCCGGCCGCGCTGCCGCGCCTGTCCGAGCATTTCTCCGGCTGCTTTTC GCCGGCTCCCGGGCCGATCACGCTCGACGTCGCGATCCGCGACGCGGCCAACCTGCTCGCGAACGAAGCAGAACAGTTGA CACGCCTGAAGTACGGTGCACACTGA
Upstream 100 bases:
>100_bases CCACCCCGGGCCCGCCATCCTGTAAGCTCCGATAGCGTATGAGCCACCCTCGTGGCTCGACCACTTATTCTTCACACCAA TCACGCCTTCCGGAGACACC
Downstream 100 bases:
>100_bases CCGTTGACCCGAGCGCGCGATACAGGAACAATCGGGCCCGCCCTTTTTCTTCAGGATTCGACATGAAAGGCCGTCAAGCC GGGCTCGATCAGTTTCTAAC
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAMLAGGGTRRTLRVAGASLAARD AAVGVIDARTAIVETAEIVGITDPVGMSVPVDARSTRGMGEAIRALLDDGVRRFFVALGGSSTNDAGAGLLAGLGLQCFD ADGQPVEPVPSRLADIARIDASGLDPRLKETEFVGMSDVDNPLTGAHGATAVFGPQKGVTAAQVATLDAALARFADLLEA ALDRRGRELPGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGAEWLITGEGRSDVQTLHGKAPFIACRHARAAG VSASLLSGAIDPAALPRLSEHFSGCFSPAPGPITLDVAIRDAANLLANEAEQLTRLKYGAH
Sequences:
>Translated_381_residues MPHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAMLAGGGTRRTLRVAGASLAARD AAVGVIDARTAIVETAEIVGITDPVGMSVPVDARSTRGMGEAIRALLDDGVRRFFVALGGSSTNDAGAGLLAGLGLQCFD ADGQPVEPVPSRLADIARIDASGLDPRLKETEFVGMSDVDNPLTGAHGATAVFGPQKGVTAAQVATLDAALARFADLLEA ALDRRGRELPGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGAEWLITGEGRSDVQTLHGKAPFIACRHARAAG VSASLLSGAIDPAALPRLSEHFSGCFSPAPGPITLDVAIRDAANLLANEAEQLTRLKYGAH >Mature_380_residues PHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAMLAGGGTRRTLRVAGASLAARDA AVGVIDARTAIVETAEIVGITDPVGMSVPVDARSTRGMGEAIRALLDDGVRRFFVALGGSSTNDAGAGLLAGLGLQCFDA DGQPVEPVPSRLADIARIDASGLDPRLKETEFVGMSDVDNPLTGAHGATAVFGPQKGVTAAQVATLDAALARFADLLEAA LDRRGRELPGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGAEWLITGEGRSDVQTLHGKAPFIACRHARAAGV SASLLSGAIDPAALPRLSEHFSGCFSPAPGPITLDVAIRDAANLLANEAEQLTRLKYGAH
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=309, Percent_Identity=39.1585760517799, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1786724, Length=309, Percent_Identity=42.3948220064725, Blast_Score=187, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 38676; Mature: 38545
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAML CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHH AGGGTRRTLRVAGASLAARDAAVGVIDARTAIVETAEIVGITDPVGMSVPVDARSTRGMG CCCCCCEEEEECCCHHHHHHHHEEEEHHHHHHHHHHHHEECCCCCCCCCCCCCHHCCCHH EAIRALLDDGVRRFFVALGGSSTNDAGAGLLAGLGLQCFDADGQPVEPVPSRLADIARID HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHC ASGLDPRLKETEFVGMSDVDNPLTGAHGATAVFGPQKGVTAAQVATLDAALARFADLLEA CCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ALDRRGRELPGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGAEWLITGEGRSD HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCHH VQTLHGKAPFIACRHARAAGVSASLLSGAIDPAALPRLSEHFSGCFSPAPGPITLDVAIR HHHHCCCCCEEEECCHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHH DAANLLANEAEQLTRLKYGAH HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAML CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHH AGGGTRRTLRVAGASLAARDAAVGVIDARTAIVETAEIVGITDPVGMSVPVDARSTRGMG CCCCCCEEEEECCCHHHHHHHHEEEEHHHHHHHHHHHHEECCCCCCCCCCCCCHHCCCHH EAIRALLDDGVRRFFVALGGSSTNDAGAGLLAGLGLQCFDADGQPVEPVPSRLADIARID HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHC ASGLDPRLKETEFVGMSDVDNPLTGAHGATAVFGPQKGVTAAQVATLDAALARFADLLEA CCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ALDRRGRELPGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGAEWLITGEGRSD HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCHH VQTLHGKAPFIACRHARAAGVSASLLSGAIDPAALPRLSEHFSGCFSPAPGPITLDVAIR HHHHCCCCCEEEECCHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHH DAANLLANEAEQLTRLKYGAH HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]