Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is ispZ [H]

Identifier: 116689931

GI number: 116689931

Start: 2118768

End: 2119298

Strand: Direct

Name: ispZ [H]

Synonym: Bcen2424_1910

Alternate gene names: 116689931

Gene position: 2118768-2119298 (Clockwise)

Preceding gene: 116689930

Following gene: 116689932

Centisome position: 60.82

GC content: 59.13

Gene sequence:

>531_bases
ATGAAATTCCTGTTCGATCTGTTTCCGATCATCCTGTTTTTTGTCGCCTTCAAGGTCTGGGGCATCTTCACCGCCACCGC
CGTCGCGATCGTCGCGACGCTGGCCCAGGTCGCCTGGGTCGCCTTCCGGCACCGGAAGGTCGACACGATGCTGTGGGTCA
GCCTCGGCGTGATCGTCGTGTTCGGTGGCGCCACCCTCGTCCTGCATGACGAGAAATTCATTCAATGGAAACCGACTGTG
TTGTACTGGCTGTTTGCGATCGGGCTGCTCGCCGCACGCTATGCGTTCGGCAAGAACCTGATCGAGAAGATGATGGGCAA
GCAGCTCACGCTGCCCGTGCCCGTGTGGGACAAGCTGAACGTCGCCTGGGCGCTGTTCTTCGCGGTGCTCGGCGTCGCGA
ACCTGTACGTGGTGCACAACTTCACCGAATCGCAATGGGTGAACTTCAAGCTGTTCGGTACGACGGGCGCGATGGTCGTG
TTCATCATCCTGCAGAGCCTGTGGCTCACGAAGTACCTGAAGGACGAATGA

Upstream 100 bases:

>100_bases
GCCCGGGGCGGCCCGCCCCCGATCCGCGACGGCGATGCCTGGCGGGTCCCTACAACGGTGACGGGCCGCGCCAGCGGCCC
GTCACGCAGCTGCGAGCGCC

Downstream 100 bases:

>100_bases
CATGAGCGACGCCTTTCTCCACGCCTCCGCCGACGAACGCATCGCGCTGATCGAAGCGCGCCTCACCGCGTCGCTCGCGC
CGCTGTCGCTCACCGTGCGC

Product: intracellular septation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV
LYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLNVAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVV
FIILQSLWLTKYLKDE

Sequences:

>Translated_176_residues
MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV
LYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLNVAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVV
FIILQSLWLTKYLKDE
>Mature_176_residues
MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV
LYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLNVAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVV
FIILQSLWLTKYLKDE

Specific function: Involved in cell division; probably involved in intracellular septation [H]

COG id: COG2917

COG function: function code D; Intracellular septation protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ispZ family [H]

Homologues:

Organism=Escherichia coli, GI1787507, Length=176, Percent_Identity=43.1818181818182, Blast_Score=156, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006008 [H]

Pfam domain/function: PF04279 IspA [H]

EC number: NA

Molecular weight: Translated: 20112; Mature: 20112

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGGATLVLHDEKFIQWKPTVLYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLN
CCCEEEEEECCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVVFIILQSLWLTKYLKDE
HHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFLFDLFPIILFFVAFKVWGIFTATAVAIVATLAQVAWVAFRHRKVDTMLWVSLGVIVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGGATLVLHDEKFIQWKPTVLYWLFAIGLLAARYAFGKNLIEKMMGKQLTLPVPVWDKLN
CCCEEEEEECCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VAWALFFAVLGVANLYVVHNFTESQWVNFKLFGTTGAMVVFIILQSLWLTKYLKDE
HHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA