Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689877
Identifier: 116689877
GI number: 116689877
Start: 2061699
End: 2062154
Strand: Direct
Name: 116689877
Synonym: Bcen2424_1856
Alternate gene names: NA
Gene position: 2061699-2062154 (Clockwise)
Preceding gene: 116689870
Following gene: 116689878
Centisome position: 59.18
GC content: 67.76
Gene sequence:
>456_bases GTGCCCCGGCGCGCGAAACCGGCCAGCGGGGCCCCTGCGGCCCGGCCCATCCATTCCCCTACGGAACCGCGGAATACCGA TTTGAAACTGCACCAGGACACGAGCGGCGCGCTCAACACCGTCACCGGCTACGGCCCCGATTATGTCGACGTCAATCTCG AACGCCATGAAACGAGCGTCATCGTGCTGCCCGGCGCGCCGGTCCAGGCCTGGCCCGTGTCGTCGTTCGACGCGCTCGCG CCCGAGCATTTCGCGATGCTGCTCGACCCGACGCCCGAACTCGTGATCTTCGGCAGCGGCGCGCGGCTGCGCTTTCCGCA CCCGCGCCTCGTCGCGGCGCTCACCGCGAAGCGGATCGGCGTCGAGACGATGGATTTCCAGGCCGCCTGCCGCACCTACA ACATCCTGATGGCCGAGGGCCGCAAAGTCGCCGCCGCGCTCTTAATTGAACGTTAA
Upstream 100 bases:
>100_bases GGCGCCCGGGGGCGACCAAAAAGTTATAATTTAGCGGATTTTGGCCGACTTTCGCAATGCACCATAGCCGCGCCGGGCCC GCGCCGTCGGGCGTCCGCGC
Downstream 100 bases:
>100_bases TCCCCGATGCGGTAAAACTCGGGCCGGCGCAGCGGGTCGATCCCCCGATCGGCCCGGCCAGGCCGCCCGCCCCGGCGCTG CCCGCCGGCGGCCCCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPRRAKPASGAPAARPIHSPTEPRNTDLKLHQDTSGALNTVTGYGPDYVDVNLERHETSVIVLPGAPVQAWPVSSFDALA PEHFAMLLDPTPELVIFGSGARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEGRKVAAALLIER
Sequences:
>Translated_151_residues MPRRAKPASGAPAARPIHSPTEPRNTDLKLHQDTSGALNTVTGYGPDYVDVNLERHETSVIVLPGAPVQAWPVSSFDALA PEHFAMLLDPTPELVIFGSGARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEGRKVAAALLIER >Mature_150_residues PRRAKPASGAPAARPIHSPTEPRNTDLKLHQDTSGALNTVTGYGPDYVDVNLERHETSVIVLPGAPVQAWPVSSFDALAP EHFAMLLDPTPELVIFGSGARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEGRKVAAALLIER
Specific function: Unknown
COG id: COG3737
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16360; Mature: 16229
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRAKPASGAPAARPIHSPTEPRNTDLKLHQDTSGALNTVTGYGPDYVDVNLERHETSV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCEEEEEEECCCEEE IVLPGAPVQAWPVSSFDALAPEHFAMLLDPTPELVIFGSGARLRFPHPRLVAALTAKRIG EEECCCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEECCCCHHHHHHHHHHCC VETMDFQAACRTYNILMAEGRKVAAALLIER CEECCHHHHHHEEEEEEECCCEEEEEEEECC >Mature Secondary Structure PRRAKPASGAPAARPIHSPTEPRNTDLKLHQDTSGALNTVTGYGPDYVDVNLERHETSV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCEEEEEEECCCEEE IVLPGAPVQAWPVSSFDALAPEHFAMLLDPTPELVIFGSGARLRFPHPRLVAALTAKRIG EEECCCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCEEECCCCHHHHHHHHHHCC VETMDFQAACRTYNILMAEGRKVAAALLIER CEECCHHHHHHEEEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA