Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689870
Identifier: 116689870
GI number: 116689870
Start: 2054494
End: 2055054
Strand: Direct
Name: 116689870
Synonym: Bcen2424_1849
Alternate gene names: NA
Gene position: 2054494-2055054 (Clockwise)
Preceding gene: 116689867
Following gene: 116689877
Centisome position: 58.97
GC content: 70.23
Gene sequence:
>561_bases ATGACTGCCCTGCCCGCCTCGACCCAACCCGCATCGGCCCGCCCCCGCGACGCCGAGCCGACCGAAGACAATATCCGCGA TCTCGTCTACGCGTTCTACGACCGCGTGCGCGCCGATCCGCTGCTCGGGCCGGTGTTCGACGCGAAGCTCGCCGGCCGCT GGGACGATCATTTGCCGAAGATGGTGACGTTCTGGTCGAGCCTCGTGCTCGGCACCAAGGGCTATCGCGGCAACGTGCAA CAGGCGCACCAGCCGCTCGACGGGGTCGAGCCGGCCCATTTCAGCCGCTGGCTGTCGCTGTTCCTGAAAACGGTCGAAGC GCGCTACGCGCCGCCCGCGGCGATCCGCTTCATGGAGCCCGCGCTGCGGATCGCGCAGAGCCTGCAGTTGAGCCGGTTCG GTTGGGACTACCGGATTCCGCCCGAGCAGCAGGCGCTGCTCGACGCGATCGCGCCGCGCCGCCGCGACGCGGGCGACGAT CCGCACGCGTTGCCGTCGCGCGCCCGCGGCGAGCCGTTTCCGACGAAGATCATCGGGCGCGGCATCGACCCGGACGCGTA A
Upstream 100 bases:
>100_bases GCTATTTTGCGTCAAAATCCGGCCGGCGTCCTGCTCGTCACCCGCGCCGCCCGCCCCGCTGCTGTCCCGCCGCTGCTCCG ATCTACCGGCCCTTTTTGTC
Downstream 100 bases:
>100_bases CGCCCGTCGTGTGCGACACCGGCGCGCATGCGACACATCGCCGCACCGCCCGCGCGCCGCGCTCAGCTCAGCGCGGCGTG TTGCCCGACTCGACGCCCCA
Product: globin
Products: NA
Alternate protein names: Globin-Like Protein; SEC-Independent Protein Translocase Protein TatC; Globin Family Protein; Truncated Hemoglobin-Like Protein; Sec-Independent Protein Translocase Protein Tatc; Sec-Independent Protein Translocase Protein TatC; Protozoan/Cyanobacterial Globin Family Protein; Truncated Hemoglobins; Hemoglobin; Sec-Independent Protein Translocase; Sec-Independent Protein Translocase Protein; Globin Family; SEC-Independent Protein Translocase Protein TATC; Truncated Hemoglobin Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTALPASTQPASARPRDAEPTEDNIRDLVYAFYDRVRADPLLGPVFDAKLAGRWDDHLPKMVTFWSSLVLGTKGYRGNVQ QAHQPLDGVEPAHFSRWLSLFLKTVEARYAPPAAIRFMEPALRIAQSLQLSRFGWDYRIPPEQQALLDAIAPRRRDAGDD PHALPSRARGEPFPTKIIGRGIDPDA
Sequences:
>Translated_186_residues MTALPASTQPASARPRDAEPTEDNIRDLVYAFYDRVRADPLLGPVFDAKLAGRWDDHLPKMVTFWSSLVLGTKGYRGNVQ QAHQPLDGVEPAHFSRWLSLFLKTVEARYAPPAAIRFMEPALRIAQSLQLSRFGWDYRIPPEQQALLDAIAPRRRDAGDD PHALPSRARGEPFPTKIIGRGIDPDA >Mature_185_residues TALPASTQPASARPRDAEPTEDNIRDLVYAFYDRVRADPLLGPVFDAKLAGRWDDHLPKMVTFWSSLVLGTKGYRGNVQQ AHQPLDGVEPAHFSRWLSLFLKTVEARYAPPAAIRFMEPALRIAQSLQLSRFGWDYRIPPEQQALLDAIAPRRRDAGDDP HALPSRARGEPFPTKIIGRGIDPDA
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20808; Mature: 20677
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPASTQPASARPRDAEPTEDNIRDLVYAFYDRVRADPLLGPVFDAKLAGRWDDHLPK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH MVTFWSSLVLGTKGYRGNVQQAHQPLDGVEPAHFSRWLSLFLKTVEARYAPPAAIRFMEP HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ALRIAQSLQLSRFGWDYRIPPEQQALLDAIAPRRRDAGDDPHALPSRARGEPFPTKIIGR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCC GIDPDA CCCCCC >Mature Secondary Structure TALPASTQPASARPRDAEPTEDNIRDLVYAFYDRVRADPLLGPVFDAKLAGRWDDHLPK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH MVTFWSSLVLGTKGYRGNVQQAHQPLDGVEPAHFSRWLSLFLKTVEARYAPPAAIRFMEP HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ALRIAQSLQLSRFGWDYRIPPEQQALLDAIAPRRRDAGDDPHALPSRARGEPFPTKIIGR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCC GIDPDA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA