Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689773
Identifier: 116689773
GI number: 116689773
Start: 1948786
End: 1948989
Strand: Direct
Name: 116689773
Synonym: Bcen2424_1752
Alternate gene names: NA
Gene position: 1948786-1948989 (Clockwise)
Preceding gene: 116689768
Following gene: 116689774
Centisome position: 55.94
GC content: 63.24
Gene sequence:
>204_bases ATGGCCTCCAATCTTCACGATCTTCCCGACAGCCCCTGCATCGGCGTGTGCTCGACGCTCTTCGACGAAGTCTGCAAGGG CTGCGGCCGCACGGCCGCCGAAGTCTCGAACTGGGTGTTCCTGAGCGACGACGAAAAGCGCGCGGTGTGGGAGCGCATCA CGCGCGAAGGCACCGCGATGCGCTTCCAGTACGACAAGCTGTAA
Upstream 100 bases:
>100_bases CCGCTCCCGCACCGGAACAGCACGCCGGCGCGAGCGTCCGGCCGGGCCGCCGCGATGCATTAAAATGGCGGCTGACGATT CAACTGCGCGAACCCTCCCG
Downstream 100 bases:
>100_bases AGCGTCCCGCGTCGGCGCATGCCGACGCGATGCGAACGATCGGGCGCCCGCTGCCCGCTCACACGCCGCTCGCTCGCCCC CCGGCCGACTTCATCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Hypothethical Protein DUF
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MASNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLSDDEKRAVWERITREGTAMRFQYDKL
Sequences:
>Translated_67_residues MASNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLSDDEKRAVWERITREGTAMRFQYDKL >Mature_66_residues ASNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLSDDEKRAVWERITREGTAMRFQYDKL
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7571; Mature: 7439
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLSDDEKRAVWERITREGTAM CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCEEECCCHHHHHHHHHHCCCCEE RFQYDKL EEECCCC >Mature Secondary Structure ASNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLSDDEKRAVWERITREGTAM CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCEEECCCHHHHHHHHHHCCCCEE RFQYDKL EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA