Click here to switch to the map view.

The map label for this gene is yhcF [H]

Identifier: 116689774

GI number: 116689774

Start: 1949596

End: 1950276

Strand: Direct

Name: yhcF [H]

Synonym: Bcen2424_1753

Alternate gene names: 116689774

Gene position: 1949596-1950276 (Clockwise)

Preceding gene: 116689773

Following gene: 116689775

Centisome position: 55.96

GC content: 62.56

Gene sequence:

>681_bases
ATGAAATTCGTTAAGATGACGAACCAAGCCTCGCGCCTCGTGATTGCAGGCCTGCTCGCATGGGGAACCAGCGCAGCATT
CGCCGACACGTTCGACGTCAAGGTCACCGGCACGGTCAAGCCCGGCGCCTGCACGCCGACGCTGGCCGGCGGCGGCACGT
TCGATTACGGGCTGATCGGCTCGGGCGAACTCAGCCCGACCGCGCCCACGCTGCTCGCGATCCTGTCGGATTCGATCACG
ATCACCTGCGATGCCGCCGCGCGCGTCGCATTGACGGCGCAGGATAATCGCGCCGGCACCGGCGCTCTTTCCGGAAATAT
CAATTTCTTCGGCATGTCGAAATCGGATATTGTTCAATTCGGCCTTGGCACGGCCAGCGGCAAGAATATCGGCGGCTTTG
CATTCCGTTTCCGGAAGAACTCGTTCCAGGCCGACGGCGCGGCCGTCGATTCGATTTATTCGAGCACCAAGGGCACCACC
TGGACGGCTTCCGACGGCGTGGTCGACAACACCGGCGGCTACGAGTCGTGGGCCAAGAAAGGTCAGACCGTGCCGGTCGC
GGCGAAGGTGTTCTCCGGCACGCTCGACGTGCAGGCCGCGATCGACAAGACGTCGAATCTCGACCTCAGCCAGGAAATCA
ATCTCGACGGCCTCGCCACCGTGTCCCTCGTGTACCTGTAA

Upstream 100 bases:

>100_bases
CGGAAATAACCGCGAGCAAGTTTCATTTCATTAATCCAGACAAACCCGGATCGCCGAATCCATTTTCGGCATTCCGGCTT
GCCACCAGGAACACGTCCAG

Downstream 100 bases:

>100_bases
TGCCGGTACGCGTCGTGCCATTGATTGACTCGATCGCCTGACAGGTGTCGACCGCGCCGCCGCTTCGCGAAGCGGCGGCG
CGACGCACGCTTGCGCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKFVKMTNQASRLVIAGLLAWGTSAAFADTFDVKVTGTVKPGACTPTLAGGGTFDYGLIGSGELSPTAPTLLAILSDSIT
ITCDAAARVALTAQDNRAGTGALSGNINFFGMSKSDIVQFGLGTASGKNIGGFAFRFRKNSFQADGAAVDSIYSSTKGTT
WTASDGVVDNTGGYESWAKKGQTVPVAAKVFSGTLDVQAAIDKTSNLDLSQEINLDGLATVSLVYL

Sequences:

>Translated_226_residues
MKFVKMTNQASRLVIAGLLAWGTSAAFADTFDVKVTGTVKPGACTPTLAGGGTFDYGLIGSGELSPTAPTLLAILSDSIT
ITCDAAARVALTAQDNRAGTGALSGNINFFGMSKSDIVQFGLGTASGKNIGGFAFRFRKNSFQADGAAVDSIYSSTKGTT
WTASDGVVDNTGGYESWAKKGQTVPVAAKVFSGTLDVQAAIDKTSNLDLSQEINLDGLATVSLVYL
>Mature_226_residues
MKFVKMTNQASRLVIAGLLAWGTSAAFADTFDVKVTGTVKPGACTPTLAGGGTFDYGLIGSGELSPTAPTLLAILSDSIT
ITCDAAARVALTAQDNRAGTGALSGNINFFGMSKSDIVQFGLGTASGKNIGGFAFRFRKNSFQADGAAVDSIYSSTKGTT
WTASDGVVDNTGGYESWAKKGQTVPVAAKVFSGTLDVQAAIDKTSNLDLSQEINLDGLATVSLVYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli gltF [H]

Homologues:

Organism=Escherichia coli, GI1789613, Length=237, Percent_Identity=31.6455696202532, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1789608, Length=249, Percent_Identity=29.718875502008, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010546 [H]

Pfam domain/function: PF06551 DUF1120 [H]

EC number: NA

Molecular weight: Translated: 23188; Mature: 23188

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVKMTNQASRLVIAGLLAWGTSAAFADTFDVKVTGTVKPGACTPTLAGGGTFDYGLIG
CCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEE
SGELSPTAPTLLAILSDSITITCDAAARVALTAQDNRAGTGALSGNINFFGMSKSDIVQF
CCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCEEECCEEEEECCHHHHEEE
GLGTASGKNIGGFAFRFRKNSFQADGAAVDSIYSSTKGTTWTASDGVVDNTGGYESWAKK
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEECCCCHHHHHHC
GQTVPVAAKVFSGTLDVQAAIDKTSNLDLSQEINLDGLATVSLVYL
CCCCEEEHEECCCCEEEEEEECCCCCCCCHHCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKFVKMTNQASRLVIAGLLAWGTSAAFADTFDVKVTGTVKPGACTPTLAGGGTFDYGLIG
CCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEE
SGELSPTAPTLLAILSDSITITCDAAARVALTAQDNRAGTGALSGNINFFGMSKSDIVQF
CCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCEEECCEEEEECCHHHHEEE
GLGTASGKNIGGFAFRFRKNSFQADGAAVDSIYSSTKGTTWTASDGVVDNTGGYESWAKK
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEECCCCHHHHHHC
GQTVPVAAKVFSGTLDVQAAIDKTSNLDLSQEINLDGLATVSLVYL
CCCCEEEHEECCCCEEEEEEECCCCCCCCHHCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]