Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689764
Identifier: 116689764
GI number: 116689764
Start: 1938527
End: 1939096
Strand: Reverse
Name: 116689764
Synonym: Bcen2424_1743
Alternate gene names: NA
Gene position: 1939096-1938527 (Counterclockwise)
Preceding gene: 116689765
Following gene: 116689759
Centisome position: 55.66
GC content: 64.74
Gene sequence:
>570_bases TTGCCGATAATGGCGCGTTCGATTTCAGCGCTTTCGCCCCCGCCGATGAAAAGACATGCCCTTTCGCGTTGCCTGTTGCT CGCAGTCGCAGCGCTGGCCAGCCCGGCGCACGCCGCCGACTACGCGTGGACCGATGCGGTCGGTGCGCACGCGGTGACGC TCGCCAGAACCGCGTCCGGCGACGACGTCGAACTCAAGGTGTCCGCGACGCTCGACGGCCACCCCGACTGGACGGTGCGC GACTACGTGAAGGATTGCCCGGTCGACGTGATTCTCGATGTCGTGCCGAAGTCGATCGAAATGCGCGACCTGCTCGGCAA CGGCCGCAAGCAGTTCCTGTTCGCGTACAAGATCGGTTGCCGCGGCGACGTGAGCGCCGATCAGGTGAAGTACTTTCTGA TCGACGCGGGCACCAAATACGTGCTGCGCGGCGAGGAAACCGTCACGGTCAACGGCAAGTTCGTCGACGGCGGCGCAGCG CCCGTGCCGAATGCGGACCTGAAGGCGCAGCCCGCGTTTCTGCGCTACATGATGAAGCGCTGGCGCGCGATCAGCATGCG TAACGACTAG
Upstream 100 bases:
>100_bases TGAGCGAGCGGACACTGTACCGGCGGATGAAGGCGCTAGGCCTCGGCTCGCGCGAGCGCTGAACGGGCGGGTCGCGCGCG GCTGGCGGCGGCACGCGGCT
Downstream 100 bases:
>100_bases GCGGGCGCCGGGCCGTCGTGCGCGCGATACCGGCTGCCCATGGTGAAACGGGCGGCACACGGGAACCTCGCCTGCCGCCC GCCCGTCATGCGATCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MPIMARSISALSPPPMKRHALSRCLLLAVAALASPAHAADYAWTDAVGAHAVTLARTASGDDVELKVSATLDGHPDWTVR DYVKDCPVDVILDVVPKSIEMRDLLGNGRKQFLFAYKIGCRGDVSADQVKYFLIDAGTKYVLRGEETVTVNGKFVDGGAA PVPNADLKAQPAFLRYMMKRWRAISMRND
Sequences:
>Translated_189_residues MPIMARSISALSPPPMKRHALSRCLLLAVAALASPAHAADYAWTDAVGAHAVTLARTASGDDVELKVSATLDGHPDWTVR DYVKDCPVDVILDVVPKSIEMRDLLGNGRKQFLFAYKIGCRGDVSADQVKYFLIDAGTKYVLRGEETVTVNGKFVDGGAA PVPNADLKAQPAFLRYMMKRWRAISMRND >Mature_188_residues PIMARSISALSPPPMKRHALSRCLLLAVAALASPAHAADYAWTDAVGAHAVTLARTASGDDVELKVSATLDGHPDWTVRD YVKDCPVDVILDVVPKSIEMRDLLGNGRKQFLFAYKIGCRGDVSADQVKYFLIDAGTKYVLRGEETVTVNGKFVDGGAAP VPNADLKAQPAFLRYMMKRWRAISMRND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20603; Mature: 20472
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIMARSISALSPPPMKRHALSRCLLLAVAALASPAHAADYAWTDAVGAHAVTLARTASG CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCC DDVELKVSATLDGHPDWTVRDYVKDCPVDVILDVVPKSIEMRDLLGNGRKQFLFAYKIGC CCEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCEEEEEEEEECC RGDVSADQVKYFLIDAGTKYVLRGEETVTVNGKFVDGGAAPVPNADLKAQPAFLRYMMKR CCCCCHHHEEEEEEECCCEEEEECCEEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHHH WRAISMRND HHHHCCCCC >Mature Secondary Structure PIMARSISALSPPPMKRHALSRCLLLAVAALASPAHAADYAWTDAVGAHAVTLARTASG CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCC DDVELKVSATLDGHPDWTVRDYVKDCPVDVILDVVPKSIEMRDLLGNGRKQFLFAYKIGC CCEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCEEEEEEEEECC RGDVSADQVKYFLIDAGTKYVLRGEETVTVNGKFVDGGAAPVPNADLKAQPAFLRYMMKR CCCCCHHHEEEEEEECCCEEEEECCEEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHHH WRAISMRND HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA