Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is acrR [C]
Identifier: 116689759
GI number: 116689759
Start: 1930644
End: 1931264
Strand: Reverse
Name: acrR [C]
Synonym: Bcen2424_1738
Alternate gene names: 116689759
Gene position: 1931264-1930644 (Counterclockwise)
Preceding gene: 116689764
Following gene: 116689756
Centisome position: 55.43
GC content: 65.7
Gene sequence:
>621_bases ATGAAACCACAGCGCTTAACTCGCGAGCAGAGCAGGGACCAGACGCGCGAACGTCTGCTGAAAGCCGCGCATCGCATTTT TCTGAAGAAAGGGTATGTGGCCGCGAGCGTCGAGGACATCGCGGCGGCCGCCGGCTACACGCGCGGCGCGTTCTACTCGA ATTTCCGCAGCAAGTCCGACCTGTTGCTGGAATTGCTGGAGCGCAACCACGAGGAGGTGCAGGCCGACTTCGTCGCGATT TTCGAAGGGGGCGGCACGCGCGAGCAGATGGAATCGATGTCGCTCGCGTACTACCGGACGCTGTTTCGCGACGACGAGTA CTCGCTGCTGTGGGGCGAGGCGAAGCTGCAGGCGGCGCGCGACGCGAAGTTCCGCGTGCGCTTCAACCAGTTCCTGCACG GCAAGCGCGTGCAGATGGCCGAATTCATCCAGCGCTTCGCCGAGCGCTCGGGCACGCCGCTGCTGCTGCCGGCCGATACG CTCGCGTTCGGGCTGATGTGCCTGTGCGACGGCGTGCAGTCGTACTACACGGCCGATCCGCAGCACGTGTCGGCCGACGT GGCCGAGTCGGTGCTTGGCGGGTTCTTCGCGCGGGTCGTGCTGGGGCGTGCGCCGGACTGA
Upstream 100 bases:
>100_bases AGACGAACGACATCGTCAGAAACTGTGGCGAATTCTAATACACACCTGTATCTGAATGCAAAGATGAATCTGAAAGGGAA GGGATGCTAGACTGCGCGGC
Downstream 100 bases:
>100_bases CCGGCGCGGGCGGTGCGAGTGGTGCGGCGACGCGCGTCAGCGTTCGCCGGTCATCCGCCGGTACGCGTCGAGCAGCGACG TCTTGTAGACCACGCCCGCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKPQRLTREQSRDQTRERLLKAAHRIFLKKGYVAASVEDIAAAAGYTRGAFYSNFRSKSDLLLELLERNHEEVQADFVAI FEGGGTREQMESMSLAYYRTLFRDDEYSLLWGEAKLQAARDAKFRVRFNQFLHGKRVQMAEFIQRFAERSGTPLLLPADT LAFGLMCLCDGVQSYYTADPQHVSADVAESVLGGFFARVVLGRAPD
Sequences:
>Translated_206_residues MKPQRLTREQSRDQTRERLLKAAHRIFLKKGYVAASVEDIAAAAGYTRGAFYSNFRSKSDLLLELLERNHEEVQADFVAI FEGGGTREQMESMSLAYYRTLFRDDEYSLLWGEAKLQAARDAKFRVRFNQFLHGKRVQMAEFIQRFAERSGTPLLLPADT LAFGLMCLCDGVQSYYTADPQHVSADVAESVLGGFFARVVLGRAPD >Mature_206_residues MKPQRLTREQSRDQTRERLLKAAHRIFLKKGYVAASVEDIAAAAGYTRGAFYSNFRSKSDLLLELLERNHEEVQADFVAI FEGGGTREQMESMSLAYYRTLFRDDEYSLLWGEAKLQAARDAKFRVRFNQFLHGKRVQMAEFIQRFAERSGTPLLLPADT LAFGLMCLCDGVQSYYTADPQHVSADVAESVLGGFFARVVLGRAPD
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23360; Mature: 23360
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPQRLTREQSRDQTRERLLKAAHRIFLKKGYVAASVEDIAAAAGYTRGAFYSNFRSKSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHH LLLELLERNHEEVQADFVAIFEGGGTREQMESMSLAYYRTLFRDDEYSLLWGEAKLQAAR HHHHHHHCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH DAKFRVRFNQFLHGKRVQMAEFIQRFAERSGTPLLLPADTLAFGLMCLCDGVQSYYTADP CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCH QHVSADVAESVLGGFFARVVLGRAPD HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKPQRLTREQSRDQTRERLLKAAHRIFLKKGYVAASVEDIAAAAGYTRGAFYSNFRSKSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHH LLLELLERNHEEVQADFVAIFEGGGTREQMESMSLAYYRTLFRDDEYSLLWGEAKLQAAR HHHHHHHCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH DAKFRVRFNQFLHGKRVQMAEFIQRFAERSGTPLLLPADTLAFGLMCLCDGVQSYYTADP CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCH QHVSADVAESVLGGFFARVVLGRAPD HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA