Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689723
Identifier: 116689723
GI number: 116689723
Start: 1888412
End: 1888738
Strand: Reverse
Name: 116689723
Synonym: Bcen2424_1701
Alternate gene names: NA
Gene position: 1888738-1888412 (Counterclockwise)
Preceding gene: 116689724
Following gene: 116689722
Centisome position: 54.21
GC content: 66.06
Gene sequence:
>327_bases ATGAAAACCCAATTGATCGCTGCCCTGTTCGTCGCTGTTTCGGCTGCCGTTGCCGCTCCCGCGTTTGCCAATGAAGCCAC CGTGACGCGTGCGCAGGTGCGCGCCGAACTCGCGCAGCTTCAACACGTCGGCTATCCGCTGAACCGCGCGACGGACGCTA CCTACCCCAACGATCTGCAGGCCGCGTTGACGCAGATCCACGCCGACGACGCCGTCGCGGCCAACGCACCGGCTTCCGGC TACGGCGGCAACGGCGACACCGCGACGCAATCCGGCCGCCGGTATGTCGCAAGCGTGGTCGAGCGCTCGGTGTACTTCGG TCACTGA
Upstream 100 bases:
>100_bases GCGGCAACATCGACGTCGAGATCCGGATCGCCTGAACGTTGCACCGGGCGGCTGAGCGCCCCCGCTCGAATTCCCGATTC CTTTTCCATCGAGGTGAAAC
Downstream 100 bases:
>100_bases GCACCACGCCCGGTACGTGAACCCTGATCCCCGTTTATTCCTGATCCTATTTTGTCGAGGTGAATGATGAAGACCCAACT GATTGCCGCCCTTCTCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKTQLIAALFVAVSAAVAAPAFANEATVTRAQVRAELAQLQHVGYPLNRATDATYPNDLQAALTQIHADDAVAANAPASG YGGNGDTATQSGRRYVASVVERSVYFGH
Sequences:
>Translated_108_residues MKTQLIAALFVAVSAAVAAPAFANEATVTRAQVRAELAQLQHVGYPLNRATDATYPNDLQAALTQIHADDAVAANAPASG YGGNGDTATQSGRRYVASVVERSVYFGH >Mature_108_residues MKTQLIAALFVAVSAAVAAPAFANEATVTRAQVRAELAQLQHVGYPLNRATDATYPNDLQAALTQIHADDAVAANAPASG YGGNGDTATQSGRRYVASVVERSVYFGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11232; Mature: 11232
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQLIAALFVAVSAAVAAPAFANEATVTRAQVRAELAQLQHVGYPLNRATDATYPNDLQ CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH AALTQIHADDAVAANAPASGYGGNGDTATQSGRRYVASVVERSVYFGH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTQLIAALFVAVSAAVAAPAFANEATVTRAQVRAELAQLQHVGYPLNRATDATYPNDLQ CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH AALTQIHADDAVAANAPASGYGGNGDTATQSGRRYVASVVERSVYFGH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA