Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689722
Identifier: 116689722
GI number: 116689722
Start: 1888019
End: 1888348
Strand: Reverse
Name: 116689722
Synonym: Bcen2424_1700
Alternate gene names: NA
Gene position: 1888348-1888019 (Counterclockwise)
Preceding gene: 116689723
Following gene: 116689721
Centisome position: 54.2
GC content: 65.45
Gene sequence:
>330_bases ATGATGAAGACCCAACTGATTGCCGCCCTTCTCATTGCCGTGTCGGCCTCCGTCGCCGCACCGGTTTTTGCCGGCGAAAG CACCGTCACACGTGCGCAGGTGCGTGCGGAACTGGCCGCGTTGCAGCAAGCCGGCTACCAGCCGAACCGCCCCAACGATC CGAACTATCCGGCCAATATCCAGGCGGCGCTGAAACGGATTCGCGACGACGGCGCCGTCGCGGCCGATACGCAGGCAGCC GATTACGGCAGCGATGCCGGCGGTGCCGCGCAGTCCGGCAGCCGAAACACGCTGCGCACCGCCGAGCGCTCGATTTATTT CGGGCATTGA
Upstream 100 bases:
>100_bases AAGCGTGGTCGAGCGCTCGGTGTACTTCGGTCACTGAGCACCACGCCCGGTACGTGAACCCTGATCCCCGTTTATTCCTG ATCCTATTTTGTCGAGGTGA
Downstream 100 bases:
>100_bases GCGCGGCACGGCGAATTCGGCCGCTGAGGTCCGCCATATAAAGCGCATGCGATGTAATCGCGTGCGCTTTTCTATTGGTG TTGCCCGGGTCTGCGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MMKTQLIAALLIAVSASVAAPVFAGESTVTRAQVRAELAALQQAGYQPNRPNDPNYPANIQAALKRIRDDGAVAADTQAA DYGSDAGGAAQSGSRNTLRTAERSIYFGH
Sequences:
>Translated_109_residues MMKTQLIAALLIAVSASVAAPVFAGESTVTRAQVRAELAALQQAGYQPNRPNDPNYPANIQAALKRIRDDGAVAADTQAA DYGSDAGGAAQSGSRNTLRTAERSIYFGH >Mature_109_residues MMKTQLIAALLIAVSASVAAPVFAGESTVTRAQVRAELAALQQAGYQPNRPNDPNYPANIQAALKRIRDDGAVAADTQAA DYGSDAGGAAQSGSRNTLRTAERSIYFGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11361; Mature: 11361
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTQLIAALLIAVSASVAAPVFAGESTVTRAQVRAELAALQQAGYQPNRPNDPNYPANI CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QAALKRIRDDGAVAADTQAADYGSDAGGAAQSGSRNTLRTAERSIYFGH HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MMKTQLIAALLIAVSASVAAPVFAGESTVTRAQVRAELAALQQAGYQPNRPNDPNYPANI CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QAALKRIRDDGAVAADTQAADYGSDAGGAAQSGSRNTLRTAERSIYFGH HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA