Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689685

Identifier: 116689685

GI number: 116689685

Start: 1849601

End: 1849927

Strand: Direct

Name: 116689685

Synonym: Bcen2424_1663

Alternate gene names: NA

Gene position: 1849601-1849927 (Clockwise)

Preceding gene: 116689684

Following gene: 116689688

Centisome position: 53.09

GC content: 68.5

Gene sequence:

>327_bases
ATGACACGGGCACTGTTCGTCTGCAGCCGCAACCGGCTGCGCAGCCCGACGGCCGAAGCGGTGTTCGCCGCGTGGCCCGG
CGTCGAAACCGACTCCGCGGGCCTCGCGCCCGACGCGGACGTGCGGCTCTCCGTCGAGCAACTCGACTGGGCGGACATCG
TGTTCGTAATGGAGCGCGCGCACCAGGCGCGGCTGTCGGCGCAATTCGGCGCGCATCTGAAGCACCGGAAGATCGTCTGC
CTCGACATTCCCGACCGCTATGCGTTCATGCAGCCCGAGTTGGTCGCGCTGCTCGAACGCAAGGCCGGCCCGTTCCTGCG
CGTGTAA

Upstream 100 bases:

>100_bases
GAACTCGGCAAGGCCGATTACGTGCCGCACATGCTCGCGTACGTGCGGCCGGGCACGATTCCGCAAGGGTGAGCCGCCCC
CGCGGGCGCCGCGCAGCGAC

Downstream 100 bases:

>100_bases
TCGCCGCAATCGGTGCCCGAGCCGACATCGATCTCAGCGCAGCGGCCCGCTCGCGAACGCAGAAAAACAGTCGAGCCGCA
GCAGCTCGATGATCTTGCGC

Product: low molecular weight phosphotyrosine protein phosphatase

Products: NA

Alternate protein names: Protein-Tyrosine Phosphatase Low Molecular Weight; Protein-Tyrosine-Phosphatase; Phosphatase; Phosphotyrosine Protein Phosphatase; Protein Tyrosine Phosphatase; Protein Tyrosine Phosphatase-Like Protein

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERAHQARLSAQFGAHLKHRKIVC
LDIPDRYAFMQPELVALLERKAGPFLRV

Sequences:

>Translated_108_residues
MTRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERAHQARLSAQFGAHLKHRKIVC
LDIPDRYAFMQPELVALLERKAGPFLRV
>Mature_107_residues
TRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERAHQARLSAQFGAHLKHRKIVCL
DIPDRYAFMQPELVALLERKAGPFLRV

Specific function: Unknown

COG id: COG4551

COG function: function code R; Predicted protein tyrosine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12133; Mature: 12002

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERA
CCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH
HQARLSAQFGAHLKHRKIVCLDIPDRYAFMQPELVALLERKAGPFLRV
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERA
CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH
HQARLSAQFGAHLKHRKIVCLDIPDRYAFMQPELVALLERKAGPFLRV
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA