Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689685
Identifier: 116689685
GI number: 116689685
Start: 1849601
End: 1849927
Strand: Direct
Name: 116689685
Synonym: Bcen2424_1663
Alternate gene names: NA
Gene position: 1849601-1849927 (Clockwise)
Preceding gene: 116689684
Following gene: 116689688
Centisome position: 53.09
GC content: 68.5
Gene sequence:
>327_bases ATGACACGGGCACTGTTCGTCTGCAGCCGCAACCGGCTGCGCAGCCCGACGGCCGAAGCGGTGTTCGCCGCGTGGCCCGG CGTCGAAACCGACTCCGCGGGCCTCGCGCCCGACGCGGACGTGCGGCTCTCCGTCGAGCAACTCGACTGGGCGGACATCG TGTTCGTAATGGAGCGCGCGCACCAGGCGCGGCTGTCGGCGCAATTCGGCGCGCATCTGAAGCACCGGAAGATCGTCTGC CTCGACATTCCCGACCGCTATGCGTTCATGCAGCCCGAGTTGGTCGCGCTGCTCGAACGCAAGGCCGGCCCGTTCCTGCG CGTGTAA
Upstream 100 bases:
>100_bases GAACTCGGCAAGGCCGATTACGTGCCGCACATGCTCGCGTACGTGCGGCCGGGCACGATTCCGCAAGGGTGAGCCGCCCC CGCGGGCGCCGCGCAGCGAC
Downstream 100 bases:
>100_bases TCGCCGCAATCGGTGCCCGAGCCGACATCGATCTCAGCGCAGCGGCCCGCTCGCGAACGCAGAAAAACAGTCGAGCCGCA GCAGCTCGATGATCTTGCGC
Product: low molecular weight phosphotyrosine protein phosphatase
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase Low Molecular Weight; Protein-Tyrosine-Phosphatase; Phosphatase; Phosphotyrosine Protein Phosphatase; Protein Tyrosine Phosphatase; Protein Tyrosine Phosphatase-Like Protein
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERAHQARLSAQFGAHLKHRKIVC LDIPDRYAFMQPELVALLERKAGPFLRV
Sequences:
>Translated_108_residues MTRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERAHQARLSAQFGAHLKHRKIVC LDIPDRYAFMQPELVALLERKAGPFLRV >Mature_107_residues TRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERAHQARLSAQFGAHLKHRKIVCL DIPDRYAFMQPELVALLERKAGPFLRV
Specific function: Unknown
COG id: COG4551
COG function: function code R; Predicted protein tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12133; Mature: 12002
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERA CCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH HQARLSAQFGAHLKHRKIVCLDIPDRYAFMQPELVALLERKAGPFLRV HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TRALFVCSRNRLRSPTAEAVFAAWPGVETDSAGLAPDADVRLSVEQLDWADIVFVMERA CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH HQARLSAQFGAHLKHRKIVCLDIPDRYAFMQPELVALLERKAGPFLRV HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA