Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689684
Identifier: 116689684
GI number: 116689684
Start: 1848886
End: 1849572
Strand: Direct
Name: 116689684
Synonym: Bcen2424_1662
Alternate gene names: NA
Gene position: 1848886-1849572 (Clockwise)
Preceding gene: 116689683
Following gene: 116689685
Centisome position: 53.07
GC content: 67.39
Gene sequence:
>687_bases GTGGCACGGTCTTCAGGCGAGTCCGTCATCGTTCAAGCCGCTACCTCGATCAGGATGCAGGTTCGCGCCGACGCTGCTAT CGTGGGGCGAGAACCCCAACACAGGAGCGCATGCGTGTCACCCACCCAACTTCTCGTTCCGACCTATACCCAGATGTTGC GCGCACAGTCCGCATGGCTCGACAAGGCCGTCGCCCATCGGCAGGCCGCGGGCGACGAACCCGACGCGGCGATGACGCTG AGGCTCGCCCCCGACATGTATCCACTCGCCGCCCAGGTGCGCTTCTCGTGTTTCCAGGCGATGGAGCCGGTTTACCGGCT GCGCGGCGAGCCGCTGCCGGCGGCATTGCTGGCCTTGCGCGAGGCGGGCTGGAACGCCGATGCGCAACCCGGTTCGCCGG CCGATGCACAGGCGATCATCGCCGGCACGCTCACGTTTCTCGGCGAACTCGCACCCGATGCGCTCGATGGCGGCGCAGCG CGGCCGATCGCGCTCGAACTGCCGAACGGGATCGCGTTCGACATGACGGGCGAACAGTACGCGCGCGACTGGGCGCTGCC GCAGTTCTACTTCCATGCGATCGCCGCGTACGCGATCCTGCGCCATCACGGCGTCGAACTCGGCAAGGCCGATTACGTGC CGCACATGCTCGCGTACGTGCGGCCGGGCACGATTCCGCAAGGGTGA
Upstream 100 bases:
>100_bases TACAAGGCCGCGCCAGCCTCTTTCGCGCGGTTCCGGCGTCGACACGTCTGGAAGGGATGGCCGCCGGGTCTGCGTCGCTC ATGTTGCGCAGCAAAAACAA
Downstream 100 bases:
>100_bases GCCGCCCCCGCGGGCGCCGCGCAGCGACATGACACGGGCACTGTTCGTCTGCAGCCGCAACCGGCTGCGCAGCCCGACGG CCGAAGCGGTGTTCGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MARSSGESVIVQAATSIRMQVRADAAIVGREPQHRSACVSPTQLLVPTYTQMLRAQSAWLDKAVAHRQAAGDEPDAAMTL RLAPDMYPLAAQVRFSCFQAMEPVYRLRGEPLPAALLALREAGWNADAQPGSPADAQAIIAGTLTFLGELAPDALDGGAA RPIALELPNGIAFDMTGEQYARDWALPQFYFHAIAAYAILRHHGVELGKADYVPHMLAYVRPGTIPQG
Sequences:
>Translated_228_residues MARSSGESVIVQAATSIRMQVRADAAIVGREPQHRSACVSPTQLLVPTYTQMLRAQSAWLDKAVAHRQAAGDEPDAAMTL RLAPDMYPLAAQVRFSCFQAMEPVYRLRGEPLPAALLALREAGWNADAQPGSPADAQAIIAGTLTFLGELAPDALDGGAA RPIALELPNGIAFDMTGEQYARDWALPQFYFHAIAAYAILRHHGVELGKADYVPHMLAYVRPGTIPQG >Mature_227_residues ARSSGESVIVQAATSIRMQVRADAAIVGREPQHRSACVSPTQLLVPTYTQMLRAQSAWLDKAVAHRQAAGDEPDAAMTLR LAPDMYPLAAQVRFSCFQAMEPVYRLRGEPLPAALLALREAGWNADAQPGSPADAQAIIAGTLTFLGELAPDALDGGAAR PIALELPNGIAFDMTGEQYARDWALPQFYFHAIAAYAILRHHGVELGKADYVPHMLAYVRPGTIPQG
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24515; Mature: 24384
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSSGESVIVQAATSIRMQVRADAAIVGREPQHRSACVSPTQLLVPTYTQMLRAQSAWL CCCCCCCEEEEEEHHHHEEHEECCCCEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH DKAVAHRQAAGDEPDAAMTLRLAPDMYPLAAQVRFSCFQAMEPVYRLRGEPLPAALLALR HHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EAGWNADAQPGSPADAQAIIAGTLTFLGELAPDALDGGAARPIALELPNGIAFDMTGEQY HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEECCCCEEEECCCHHH ARDWALPQFYFHAIAAYAILRHHGVELGKADYVPHMLAYVRPGTIPQG HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARSSGESVIVQAATSIRMQVRADAAIVGREPQHRSACVSPTQLLVPTYTQMLRAQSAWL CCCCCCEEEEEEHHHHEEHEECCCCEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH DKAVAHRQAAGDEPDAAMTLRLAPDMYPLAAQVRFSCFQAMEPVYRLRGEPLPAALLALR HHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EAGWNADAQPGSPADAQAIIAGTLTFLGELAPDALDGGAARPIALELPNGIAFDMTGEQY HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEECCCCEEEECCCHHH ARDWALPQFYFHAIAAYAILRHHGVELGKADYVPHMLAYVRPGTIPQG HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA