Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is yaiI [C]
Identifier: 116689682
GI number: 116689682
Start: 1846757
End: 1847209
Strand: Direct
Name: yaiI [C]
Synonym: Bcen2424_1660
Alternate gene names: 116689682
Gene position: 1846757-1847209 (Clockwise)
Preceding gene: 116689681
Following gene: 116689683
Centisome position: 53.01
GC content: 70.2
Gene sequence:
>453_bases ATGCAAGTACTGGTCGATGCCGACGCGTGTCCCGCCGTCATCAAGGACATGCTGTTTCGCGCCGCGCGTCGCGCCGAAAT CTGCGTGACGCTGGTCGCGAACCAGTTTCTGCGCACGCCGCCGTCGCCGTTCATCAAGGCCGTGCAGGTGCCGGCCGGCT TCGACGTGGCCGACGCGCGCATCGTCGAGCTGGCGGAGCCGGGCGACCTCGTGATCACCGCGGACATCCCGCTGGCCGCC GCCGTGCTCGACAAGGGCGCGCATGCGCTCGACCCGCGCGGCAACTGGTTCAGCCGCGAAAACATCGAGGAGCGCCTGTC GACGCGCGCGATGATGGACCAGTTGCGCAGCGCGGGCATCGATACGGGCGGGCCGGCGCCGTTCAGCGCGCGCGACGGCA AGACGTTCGCGTCGCAGCTCGACCGGTTTCTGGCGCGGCACGCTCCGCGCTGA
Upstream 100 bases:
>100_bases GTGACGGCCGACGCGCTTCGCACCGATCTCGCCGGCTGATGGCCGGCCGGCGGTGCGCTATGATCGCCGCTTCTGCCTCC GCTCACTGGAAACCTCCGCC
Downstream 100 bases:
>100_bases CGCCCGAATTTGCCGACGTTGCACGTTGCGCCGACCGCGACGATCATTCCGTCCATGCAACCCCACCGCGACACTCTTCC GATGGACGATGCGGCCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADARIVELAEPGDLVITADIPLAA AVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGIDTGGPAPFSARDGKTFASQLDRFLARHAPR
Sequences:
>Translated_150_residues MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADARIVELAEPGDLVITADIPLAA AVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGIDTGGPAPFSARDGKTFASQLDRFLARHAPR >Mature_150_residues MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADARIVELAEPGDLVITADIPLAA AVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGIDTGGPAPFSARDGKTFASQLDRFLARHAPR
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=143, Percent_Identity=56.6433566433566, Blast_Score=163, Evalue=5e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1180_BURCA (Q1BWB8)
Other databases:
- EMBL: CP000378 - RefSeq: YP_621060.1 - STRING: Q1BWB8 - GeneID: 4092621 - GenomeReviews: CP000378_GR - KEGG: bcn:Bcen_1180 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - ProtClustDB: CLSK716319 - BioCyc: BCEN331271:BCEN_1180-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16238; Mature: 16238
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADAR CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHH IVELAEPGDLVITADIPLAAAVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGI EEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC DTGGPAPFSARDGKTFASQLDRFLARHAPR CCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADAR CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHH IVELAEPGDLVITADIPLAAAVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGI EEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC DTGGPAPFSARDGKTFASQLDRFLARHAPR CCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA