Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yaiI [C]

Identifier: 116689682

GI number: 116689682

Start: 1846757

End: 1847209

Strand: Direct

Name: yaiI [C]

Synonym: Bcen2424_1660

Alternate gene names: 116689682

Gene position: 1846757-1847209 (Clockwise)

Preceding gene: 116689681

Following gene: 116689683

Centisome position: 53.01

GC content: 70.2

Gene sequence:

>453_bases
ATGCAAGTACTGGTCGATGCCGACGCGTGTCCCGCCGTCATCAAGGACATGCTGTTTCGCGCCGCGCGTCGCGCCGAAAT
CTGCGTGACGCTGGTCGCGAACCAGTTTCTGCGCACGCCGCCGTCGCCGTTCATCAAGGCCGTGCAGGTGCCGGCCGGCT
TCGACGTGGCCGACGCGCGCATCGTCGAGCTGGCGGAGCCGGGCGACCTCGTGATCACCGCGGACATCCCGCTGGCCGCC
GCCGTGCTCGACAAGGGCGCGCATGCGCTCGACCCGCGCGGCAACTGGTTCAGCCGCGAAAACATCGAGGAGCGCCTGTC
GACGCGCGCGATGATGGACCAGTTGCGCAGCGCGGGCATCGATACGGGCGGGCCGGCGCCGTTCAGCGCGCGCGACGGCA
AGACGTTCGCGTCGCAGCTCGACCGGTTTCTGGCGCGGCACGCTCCGCGCTGA

Upstream 100 bases:

>100_bases
GTGACGGCCGACGCGCTTCGCACCGATCTCGCCGGCTGATGGCCGGCCGGCGGTGCGCTATGATCGCCGCTTCTGCCTCC
GCTCACTGGAAACCTCCGCC

Downstream 100 bases:

>100_bases
CGCCCGAATTTGCCGACGTTGCACGTTGCGCCGACCGCGACGATCATTCCGTCCATGCAACCCCACCGCGACACTCTTCC
GATGGACGATGCGGCCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADARIVELAEPGDLVITADIPLAA
AVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGIDTGGPAPFSARDGKTFASQLDRFLARHAPR

Sequences:

>Translated_150_residues
MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADARIVELAEPGDLVITADIPLAA
AVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGIDTGGPAPFSARDGKTFASQLDRFLARHAPR
>Mature_150_residues
MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADARIVELAEPGDLVITADIPLAA
AVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGIDTGGPAPFSARDGKTFASQLDRFLARHAPR

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

Organism=Escherichia coli, GI87081732, Length=143, Percent_Identity=56.6433566433566, Blast_Score=163, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1180_BURCA (Q1BWB8)

Other databases:

- EMBL:   CP000378
- RefSeq:   YP_621060.1
- STRING:   Q1BWB8
- GeneID:   4092621
- GenomeReviews:   CP000378_GR
- KEGG:   bcn:Bcen_1180
- eggNOG:   COG1671
- HOGENOM:   HBG363074
- OMA:   PLASRCV
- ProtClustDB:   CLSK716319
- BioCyc:   BCEN331271:BCEN_1180-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 16238; Mature: 16238

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADAR
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHH
IVELAEPGDLVITADIPLAAAVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGI
EEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DTGGPAPFSARDGKTFASQLDRFLARHAPR
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQVLVDADACPAVIKDMLFRAARRAEICVTLVANQFLRTPPSPFIKAVQVPAGFDVADAR
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHH
IVELAEPGDLVITADIPLAAAVLDKGAHALDPRGNWFSRENIEERLSTRAMMDQLRSAGI
EEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DTGGPAPFSARDGKTFASQLDRFLARHAPR
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA