Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689681
Identifier: 116689681
GI number: 116689681
Start: 1846087
End: 1846695
Strand: Direct
Name: 116689681
Synonym: Bcen2424_1659
Alternate gene names: NA
Gene position: 1846087-1846695 (Clockwise)
Preceding gene: 116689680
Following gene: 116689682
Centisome position: 52.99
GC content: 74.71
Gene sequence:
>609_bases GTGCCGGGCACGGTGCGCGCCGGCACGGCCATCGCGTGGCCGGCGACGCTCGCCGCGAAACGCGGCGGCCCGCTGCATCG CGAGCATCTGCGCTTCGGGAAACGCGCGGGTACGCCGCGTGCGCTGCATTGCTTCGTGCTCGACTGTTCGGCGTCGATGT TGTCGCACGAACGACTCGCGCTCGCGAAGGGGCTGATCGTCGCGTATTTCGATCAGGCCGCGCGCGAGCGGGTCGAAACC GCGCTGATTTGCTTCGGCGGTCAAGGCGCCGCGCGGCGCTTCGGCCCGGCCGTGCCGCGCTGGTGGAACGCGCGCTGGCT CGAACCGGTCGACGGCGGCGGCGGTACGCCGCTCGCGGACGGCATCGAGGCCGCCGCGCAGCTGCTCGCCTGCGCGGCAC GGCGCGAGCCCGGCAAGGCGCGCTGGCTGTGGGTGCTGTCCGACGGGCGCACGCGCGAGACGCCGGCCAGACCCGCGGCG GCCGATCACGTCGTGTTCGTCGACTTCGACGATGTGGCCGTGCGGATCGGGCAGGGCGCCCGGCTCGCCGCCGCGTGGGG CGCGCAGTGGGTGACGGCCGACGCGCTTCGCACCGATCTCGCCGGCTGA
Upstream 100 bases:
>100_bases GCGTCGTGCCGCTGCCGCTAAAAAAACGCTGAGCCATCGAGCCGGCGCCGCCGCGAACGCGATTCGCGGTCCTCGATGGC AGTCAGGCGCGGCCGCGCGC
Downstream 100 bases:
>100_bases TGGCCGGCCGGCGGTGCGCTATGATCGCCGCTTCTGCCTCCGCTCACTGGAAACCTCCGCCATGCAAGTACTGGTCGATG CCGACGCGTGTCCCGCCGTC
Product: Mg-chelatase subunit ChlD-like protein
Products: NA
Alternate protein names: Magnesium Chelatase Subunit ChlD; Protoporphyrin IX Magnesium Chelatase
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPGTVRAGTAIAWPATLAAKRGGPLHREHLRFGKRAGTPRALHCFVLDCSASMLSHERLALAKGLIVAYFDQAARERVET ALICFGGQGAARRFGPAVPRWWNARWLEPVDGGGGTPLADGIEAAAQLLACAARREPGKARWLWVLSDGRTRETPARPAA ADHVVFVDFDDVAVRIGQGARLAAAWGAQWVTADALRTDLAG
Sequences:
>Translated_202_residues MPGTVRAGTAIAWPATLAAKRGGPLHREHLRFGKRAGTPRALHCFVLDCSASMLSHERLALAKGLIVAYFDQAARERVET ALICFGGQGAARRFGPAVPRWWNARWLEPVDGGGGTPLADGIEAAAQLLACAARREPGKARWLWVLSDGRTRETPARPAA ADHVVFVDFDDVAVRIGQGARLAAAWGAQWVTADALRTDLAG >Mature_201_residues PGTVRAGTAIAWPATLAAKRGGPLHREHLRFGKRAGTPRALHCFVLDCSASMLSHERLALAKGLIVAYFDQAARERVETA LICFGGQGAARRFGPAVPRWWNARWLEPVDGGGGTPLADGIEAAAQLLACAARREPGKARWLWVLSDGRTRETPARPAAA DHVVFVDFDDVAVRIGQGARLAAAWGAQWVTADALRTDLAG
Specific function: Unknown
COG id: COG1240
COG function: function code H; Mg-chelatase subunit ChlD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21595; Mature: 21464
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTVRAGTAIAWPATLAAKRGGPLHREHLRFGKRAGTPRALHCFVLDCSASMLSHERLA CCCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHH LAKGLIVAYFDQAARERVETALICFGGQGAARRFGPAVPRWWNARWLEPVDGGGGTPLAD HHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCHHH GIEAAAQLLACAARREPGKARWLWVLSDGRTRETPARPAAADHVVFVDFDDVAVRIGQGA HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECHHEEEEECCCC RLAAAWGAQWVTADALRTDLAG EEEHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure PGTVRAGTAIAWPATLAAKRGGPLHREHLRFGKRAGTPRALHCFVLDCSASMLSHERLA CCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHH LAKGLIVAYFDQAARERVETALICFGGQGAARRFGPAVPRWWNARWLEPVDGGGGTPLAD HHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCHHH GIEAAAQLLACAARREPGKARWLWVLSDGRTRETPARPAAADHVVFVDFDDVAVRIGQGA HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECHHEEEEECCCC RLAAAWGAQWVTADALRTDLAG EEEHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA