Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is kgtP [H]
Identifier: 116689638
GI number: 116689638
Start: 1780071
End: 1781375
Strand: Direct
Name: kgtP [H]
Synonym: Bcen2424_1616
Alternate gene names: 116689638
Gene position: 1780071-1781375 (Clockwise)
Preceding gene: 116689637
Following gene: 116689639
Centisome position: 51.09
GC content: 65.98
Gene sequence:
>1305_bases ATGGACGTCCAGACCGACCAAGCTGCGCTGTCCGCGCAAGACACCCGGCGGCGCGTGTTCGCCATCGTCGGCGCCTCATC GGGCAACCTCGTCGAGTGGTTCGACTTCTACATCTACTCGTTCTGCGCGCTGTACTTCGCGCCGGCATTCTTCCCGAGCG GCAACACGACGACGCAGCTGCTGAACACGGCCGGCGTGTTCGCGGCCGGCTTCCTGATGCGTCCGATCGGCGGCTGGCTG TTCGGCCGCATCGCCGACCGGCACGGCCGTCGCGCGGCGATGATGATCTCGGTGCTGATGATGTGCGGCGGGTCGCTCGT GATCGCGGTGCTGCCGACCTATGCGCAGATCGGCGCGCTCGCGCCGGCGCTGCTGCTGGTCGCGCGCCTGTTCCAGGGCC TGTCGGTGGGCGGCGAATACGGGACGAGCGCGACCTACATGAGTGAAGTGGCATTGAAGGGCCGTCGCGGCTTCTTCGCG TCGTTCCAGTACGTGACGCTGATCGGCGGCCAGCTGTGCGCGCTGCTGGTGCTCGTGATCCTGCAGCAGACGCTGTCGGC CGGCGAGCTGAAAGCGTGGGGCTGGCGCATTCCGTTCGTGGTCGGCGCGGCGGCCGCGCTGATTTCGCTGTACCTGCGCA AATCGCTCGACGAGACGTCGACGAGCGCATCGCGCGACAAGAAGGACGCCGGCACGATCCGCGGCGTGTGGCAGCACAAG GGCGCGTTCTTCACGGTGGTCGGCTTCACGGCCGGCGGCTCGCTGATCTTCTACACGTTCACGACGTACATGCAGAAGTA CCTCGTGAACACGGCCGGCATGCACGCGAAGACGGCCAGCAACGTGATGACCGTCGCGCTGCTCGTTTACATGCTGATGC AGCCGGTGTTCGGCGCGCTGTCGGACAAGATCGGCCGCCGCACGTCGATGATCCTGTTCGGTTCGTTCGCGGTGATCGGC ACGGTGCCGCTGATGCATGCGCTGAAGGGCGTGACGAGCCCGGTGGCCGCGTTCGTGCTGATCACGGTTGCGCTGGCGAT CGTCAGCTTCTACACGTCGATCAGCGGCCTGATCAAGGCCGAGATGTTTCCGCCGGAAGTGCGCGCGATGGGCGTGGGCC TGTCGTATGCGGTCGCGAACGCGATCTTCGGCGGTTCGGCCGAGTACGTCGCGCTGTGGTTCAAGTCGATCGGCAGCGAG GAAACGTTCTACTGGTACGTGACCGTGCTGTGCGCGATCTCGCTGATCGTGTCGTGGCGGATGCGCGATCCGAGCAAGGA AGGGTACCTGCGCCACGAGCCGTGA
Upstream 100 bases:
>100_bases AATCCCGTAGCGCCGTGCGCCGGAACCGGTGCCACGTGCGACCGCACGCGGCGGCCCCAGCCGTCTCGCCCAGAAAGCAC TAAAAGGAACAGACCAACCC
Downstream 100 bases:
>100_bases TCGGTCGCGCGTGGCGCGTACTCGCATCATGACGAACGTCCCGCCGGTTGGCGGGACGTTTTTTTTGCGGCGTGCGATGA CGTGCGCGGCGGCATCCACT
Product: major facilitator superfamily metabolite/H(+) symporter
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MDVQTDQAALSAQDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSAGELKAWGWRIPFVVGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLMQPVFGALSDKIGRRTSMILFGSFAVIG TVPLMHALKGVTSPVAAFVLITVALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSIGSE ETFYWYVTVLCAISLIVSWRMRDPSKEGYLRHEP
Sequences:
>Translated_434_residues MDVQTDQAALSAQDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSAGELKAWGWRIPFVVGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLMQPVFGALSDKIGRRTSMILFGSFAVIG TVPLMHALKGVTSPVAAFVLITVALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSIGSE ETFYWYVTVLCAISLIVSWRMRDPSKEGYLRHEP >Mature_434_residues MDVQTDQAALSAQDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSAGELKAWGWRIPFVVGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLMQPVFGALSDKIGRRTSMILFGSFAVIG TVPLMHALKGVTSPVAAFVLITVALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSIGSE ETFYWYVTVLCAISLIVSWRMRDPSKEGYLRHEP
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=422, Percent_Identity=69.9052132701422, Blast_Score=575, Evalue=1e-165, Organism=Escherichia coli, GI1790550, Length=425, Percent_Identity=29.6470588235294, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1788292, Length=435, Percent_Identity=28.2758620689655, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1789941, Length=424, Percent_Identity=31.3679245283019, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI87082231, Length=325, Percent_Identity=26.1538461538462, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082404, Length=312, Percent_Identity=25.6410256410256, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 46959; Mature: 46959
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQTDQAALSAQDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQL CCCCCHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH APALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQTLSAGELKAWGWRIPFVVGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK HHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLMQPVFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDKIGRRTSMILFGSFAVIGTVPLMHALKGVTSPVAAFVLITVALAIVSFYTSISGLIKA HHHHCCHHEEHEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSIGSEETFYWYVTVLCAISLIVSWR CCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MRDPSKEGYLRHEP CCCCCCCCCCCCCC >Mature Secondary Structure MDVQTDQAALSAQDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQL CCCCCHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH APALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQTLSAGELKAWGWRIPFVVGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK HHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLMQPVFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDKIGRRTSMILFGSFAVIGTVPLMHALKGVTSPVAAFVLITVALAIVSFYTSISGLIKA HHHHCCHHEEHEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSIGSEETFYWYVTVLCAISLIVSWR CCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MRDPSKEGYLRHEP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]