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The map label for this gene is ycgB [H]

Identifier: 116689637

GI number: 116689637

Start: 1778157

End: 1779836

Strand: Direct

Name: ycgB [H]

Synonym: Bcen2424_1615

Alternate gene names: 116689637

Gene position: 1778157-1779836 (Clockwise)

Preceding gene: 116689636

Following gene: 116689638

Centisome position: 51.04

GC content: 62.56

Gene sequence:

>1680_bases
ATGACGACCCGCCATCTGCACAACGAGTCGCGCGGCTACGCGCCGCGCCCTTCCGGCGACGACACGGCCGGCCCTGCCGC
ACCGCAGCAACGCGGGCAGGCCGAACCGCCGCCGCCGGCCGCCGACTTGCCCGGTTCCGGGCAAAAGGAAGCGCGTATGA
ACGTTGCCGAACGCAAGCCGTTGCCGTGCCCGTCCGACTGGACGTTCGAATTGCTCGAGGAATACGACACGCACATCTCG
CAGGTCGCCGAACAATACGAGCTCGACATCTACCCGATCCAGCTCGAACTGATCAGCGCCGAGCAGATGATGGATGCGTA
TGCGTCGGTCGGGATGCCCGTCAACTACCGTCACTGGTCGTTCGGCAAGCACTTTCTCGCGACCGAGAAGAGCTATCGTC
GCGGCCAGATGGGCCTCGCCTACGAAATCGTCATCAATTCGAATCCGTGCATCGCGTATCTGATGGAAGAGAACACGATG
ACGATGCAGGCGCTCGTCATCGCGCACGCGGCGTACGGGCACAACTCGTTCTTCAAGGGCAACTACCTGTTCCGGCTGTG
GACCGACGCGCACGCGATCATCGATTACCTCGTGTACGCGAAGAACTACGTCGCGGAATGCGAGGAGCGCTACGGCCTCG
ATCGCGTCGAGGAACTGCTCGACTCGTGCCATGCGTTGATGAACTACGGCGTCGACCGCTACAAGCGGCCGCAGAAACCG
TCGCTGTCGAAGGAAGCGGCGCTGCGGCGCGAGCGCGAGGCGTACCTGCAGTCGCAGGTGAACGAACTCTGGCGTACGCT
GCCGGGCAAGAAGCCCGAGCTGACGGAGGAGCAGGACGACCGCTATCCGTCCGAGCCGCAGGAGAACCTGCTGTATTTCG
CGGAAAAGAATGCGCCGCTGCTCGAACCGTGGGAGCGGGAAGTGATCCGCATCGTGCGCAAGATCGGCCAGTATTTCTAT
CCGCAGCGGCAGACGCAGGTGATGAACGAAGGCTGGGCGACGTTCTGGCACTACACACTGCTCAATACGCTGTACAACCA
GGGCAAGCTGGAAGACGGCTTCATGATGGAGTTCCTGCATTCGCACAGCAACGTGGTCTACCAGCCGCCCGTCACGAAGC
CGTACTACAGCGGGATCAACCCGTATGCGCTCGGTTTCTCGATGATGAGCGACATCCGAAGGATCTGCGAAGCGCCGACG
GAGGAAGACTACAAGTGGTTTCCGGAGATCGCGGGCACGCCGTGGCTGCCGGCGATGCACTACGCGATGCGCAACTTCAA
GGACGAGAGCTTCATCGCGCAGTACCTGTCGCCGAACCTGATTCGCGAAATGCGGCTCTTCTCGGTGCTCGACGACGACA
TGCGCGATTCGCTCGAGGTATCGGCGATCCACGACGATTCCGGCTACCAGTACGTGCGGCAGGCGTTGTCGCGGCAGTAC
GACATCCATCACCGCGAGCCGAACATCCAGGTGTGGGCCGTCAACACCCGCGGCGACCGCAGCCTCACGCTGCGCCACTT
CATGACCGACAACCGCCACCTGTCGAACGACAGCGAGGAAGTGCTCAAGCACATGGCGCGGCTCTGGCAGTTCGACGTGT
ACCTGGAAAGCGTCGACGAGGCCGGCACCGTGCGCAAGCGCTACGAGTGCCGCTACGTGCCGCCGGAAGTGCGCGTGTGA

Upstream 100 bases:

>100_bases
TGGCCTTGTCGCAACCGCATCTCGCGATGAAAAAAGTGGAATCGGCTGCGGACATTTACCCGGTGTTTCGCGAATTGTTC
GAAAAGCAGGTGGAAATGTC

Downstream 100 bases:

>100_bases
TCGCCGCACGCCGGAAATGTTTGCATCGGACGCCAGCCTGCGGGCTGGCGTTTTCATATGACGAACGCGCGCCGGGAGAA
AAATTTTCTACATCGGGACG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MTTRHLHNESRGYAPRPSGDDTAGPAAPQQRGQAEPPPPAADLPGSGQKEARMNVAERKPLPCPSDWTFELLEEYDTHIS
QVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTM
TMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
SLSKEAALRREREAYLQSQVNELWRTLPGKKPELTEEQDDRYPSEPQENLLYFAEKNAPLLEPWEREVIRIVRKIGQYFY
PQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPT
EEDYKWFPEIAGTPWLPAMHYAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDDSGYQYVRQALSRQY
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDEAGTVRKRYECRYVPPEVRV

Sequences:

>Translated_559_residues
MTTRHLHNESRGYAPRPSGDDTAGPAAPQQRGQAEPPPPAADLPGSGQKEARMNVAERKPLPCPSDWTFELLEEYDTHIS
QVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTM
TMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
SLSKEAALRREREAYLQSQVNELWRTLPGKKPELTEEQDDRYPSEPQENLLYFAEKNAPLLEPWEREVIRIVRKIGQYFY
PQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPT
EEDYKWFPEIAGTPWLPAMHYAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDDSGYQYVRQALSRQY
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDEAGTVRKRYECRYVPPEVRV
>Mature_558_residues
TTRHLHNESRGYAPRPSGDDTAGPAAPQQRGQAEPPPPAADLPGSGQKEARMNVAERKPLPCPSDWTFELLEEYDTHISQ
VAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMT
MQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKPS
LSKEAALRREREAYLQSQVNELWRTLPGKKPELTEEQDDRYPSEPQENLLYFAEKNAPLLEPWEREVIRIVRKIGQYFYP
QRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPTE
EDYKWFPEIAGTPWLPAMHYAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDDSGYQYVRQALSRQYD
IHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDEAGTVRKRYECRYVPPEVRV

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=492, Percent_Identity=65.650406504065, Blast_Score=703, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 65393; Mature: 65262

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRHLHNESRGYAPRPSGDDTAGPAAPQQRGQAEPPPPAADLPGSGQKEARMNVAERKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCHHHCCC
LPCPSDWTFELLEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHCCCCCCCCCCC
FGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKG
CCCHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECC
NYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
SLSKEAALRREREAYLQSQVNELWRTLPGKKPELTEEQDDRYPSEPQENLLYFAEKNAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCEEEEECCCCCC
LEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLH
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SHSNVVYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPTEEDYKWFPEIAGTPWLPAMH
HCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHH
YAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDDSGYQYVRQALSRQY
HHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHC
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDE
CCCCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGTVRKRYECRYVPPEVRV
HHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
TTRHLHNESRGYAPRPSGDDTAGPAAPQQRGQAEPPPPAADLPGSGQKEARMNVAERKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCHHHCCC
LPCPSDWTFELLEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHCCCCCCCCCCC
FGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKG
CCCHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECC
NYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
SLSKEAALRREREAYLQSQVNELWRTLPGKKPELTEEQDDRYPSEPQENLLYFAEKNAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCEEEEECCCCCC
LEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLH
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SHSNVVYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPTEEDYKWFPEIAGTPWLPAMH
HCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHH
YAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDDSGYQYVRQALSRQY
HHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHC
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDE
CCCCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGTVRKRYECRYVPPEVRV
HHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]