Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is yeaH [C]
Identifier: 116689636
GI number: 116689636
Start: 1776892
End: 1778160
Strand: Direct
Name: yeaH [C]
Synonym: Bcen2424_1614
Alternate gene names: 116689636
Gene position: 1776892-1778160 (Clockwise)
Preceding gene: 116689635
Following gene: 116689637
Centisome position: 51.0
GC content: 62.1
Gene sequence:
>1269_bases GTGCTTCATCAAATCATCGACCGCAGGCTGGCCGGCAAGAACAAGAGCATCGCCAATCGCGAACGCTTTCTGCGTCGCGT CAAGAACTACATTCGTCGTGCCGTGTCCGACGCGGTGCGCGACCGTAGCATCAAGGATATCCAGAGCACGCAGAGCATCA CGATCCCGCGCAAGGACATCGCGGAGCCGAATTTCCGGCACGCGCCGGGCGGACGTCGCGAATACGTGCACCCCGGCAAC GAGGACTACGTGCGCGGCGACAAGATCCCGCGCCCGCAGGGCGGCTCGGGCGGCGGCGGCAGTCAGGCGAGCAACGAGGG CGAAGGGCAGGACGACTTCGTGTTCGAGCTGTCGCGCGACGAGTTCATGCAGTATTTCTTCGACGATCTCGAACTGCCGC GCCTCGTGAAGACGCACCTGCTGACGGTGCCGAGCTGGAAGAACGTGCGCGCGGGCTGGTCGGCGGAAGGCACGCCGAAC AACATCGACGTCGTGCGTTCGCTGCGCAGCGCGCTCGGCCGGCGCATCGCGCTCGGCTCGCCGCTCGTCAACGAGCTGCG CGAGCTCGAGGCCCAGCTCGAAGCGCTGAAGAGCGACCCCGAGGACCGCCGCGCGGAAATCGCGACGCTCGAGGCCGAGA TTCATCACCTGAAAGGGCGCATCTGGCGGATTCCGTTCATCGATCCGTTCGACCTGCGCTACATCAACCGCGTGAAGCAG CCGCAACCGTCGAGCCAGGCCGTGATGTTCTGCCTGATGGACGTGTCGGGCTCGATGGACGAGCAGCGCAAGGATCTCGC GAAGCGCTTCTTCATCCTGCTTTATCTGTTCCTCAAGCGCAACTACGAGCGCATCGAAGTGGTGTTCATTCGCCACCACA CGCGTGCCGAGGAAGTCGACGAGGACACCTTCTTCCATTCGACCGAAAGCGGCGGCACGGTGGTGTCGAGCGCGCTCGAA CTGATGCGCAAGGTGATGGACGAGCGCTACTCGCCGACCGAGTGGAACATCTACGGCGCGCAGGCGTCCGACGGCGACAA CTGGACTGACGATTCGCCCAAGTGTCGCAAAATCCTGGAAGAGGATATCCTCACCAAGACGCGTTACTTCGCGTATATCC AGGTCGCGCCGGAAGAGCAGAATCTGTGGCTGGAATACGCGCAACTGGCCTTGTCGCAACCGCATCTCGCGATGAAAAAA GTGGAATCGGCTGCGGACATTTACCCGGTGTTTCGCGAATTGTTCGAAAAGCAGGTGGAAATGTCATGA
Upstream 100 bases:
>100_bases CGAGTCCGTGCGGGCGCTTTCAGAGGCGCCGCCCGCATGACGGCAGACGGCATGCGCGGCGAGTGCCCCGGCAGATCGAC TTTCGAGCGGGAGACCGGGA
Downstream 100 bases:
>100_bases CGACCCGCCATCTGCACAACGAGTCGCGCGGCTACGCGCCGCGCCCTTCCGGCGACGACACGGCCGGCCCTGCCGCACCG CAGCAACGCGGGCAGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPNFRHAPGGRREYVHPGN EDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRDEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPN NIDVVRSLRSALGRRIALGSPLVNELRELEAQLEALKSDPEDRRAEIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE LMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKK VESAADIYPVFRELFEKQVEMS
Sequences:
>Translated_422_residues MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPNFRHAPGGRREYVHPGN EDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRDEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPN NIDVVRSLRSALGRRIALGSPLVNELRELEAQLEALKSDPEDRRAEIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE LMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKK VESAADIYPVFRELFEKQVEMS >Mature_422_residues MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPNFRHAPGGRREYVHPGN EDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRDEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPN NIDVVRSLRSALGRRIALGSPLVNELRELEAQLEALKSDPEDRRAEIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE LMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKK VESAADIYPVFRELFEKQVEMS
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=418, Percent_Identity=53.11004784689, Blast_Score=441, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48791; Mature: 48791
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHC AEPNFRHAPGGRREYVHPGNEDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHH EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGS HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PLVNELRELEAQLEALKSDPEDRRAEIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCC PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC EDTFFHSTESGGTVVSSALELMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILE CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKQVE HHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC MS CC >Mature Secondary Structure MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHC AEPNFRHAPGGRREYVHPGNEDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHH EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGS HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PLVNELRELEAQLEALKSDPEDRRAEIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCC PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC EDTFFHSTESGGTVVSSALELMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILE CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKQVE HHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC MS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA