Click here to switch to the map view.

The map label for this gene is yraQ [H]

Identifier: 116689615

GI number: 116689615

Start: 1754362

End: 1755420

Strand: Direct

Name: yraQ [H]

Synonym: Bcen2424_1593

Alternate gene names: 116689615

Gene position: 1754362-1755420 (Clockwise)

Preceding gene: 116689614

Following gene: 116689616

Centisome position: 50.36

GC content: 69.69

Gene sequence:

>1059_bases
ATGACGACCACACGCACTCAACCGAATCCGGCCCTCGGCTGGATGACCTTCCTGCTGATCGCGGTCGCGGGACTGTTCTA
CGTGAAATGGTTCCCGTACTACAACAAGGCGTTCGTTGCCGCCGAGCACCATTCGATCGGCCAGTCGATCCTGATGGGCA
CGTCGGCGGCCGCGCCCGAGCCGTCGCTGAAGGCGGCGCTCGACTACGCGTGGGCATACGGCAAGGCGATCTGGCAGGCG
ATGGTGCTCGGCCTGCTGCTCGGCTCGGCCGTGCAGGCGCTGCTGCCCGCGCACTGGGTGGCGCGCGTGCTCGGCCGCAC
GGGGTTCGGCAGCGTCGCCGCGGGCGGGCTGCTGTCGCTGCCCGGGATGATGTGCACGTGCTGTGCGGCGCCGGTCGTCG
CCGGCCTGCGGGCGCGCCACGCGTCGCCGGGCGGCGCGGTCGCGTTCTGGCTCGGCAACACGGTGCTGAACCCGGCGGCG
CTGGTGTTCATGGGCTTCGTGCTCGGCTGGCACTGGAGCGCGCTGCGCCTCGTGCTCGGCATCGCGATGGTGTTCGGGAT
CGGCTATCTGCTGAACCGCATCGCGCGTCCCGAAGACCGCAGCATCGATGATGCGCAGCTCGCCGCGCTGGCAGCGGAGC
AGGCCGCGGCCGGCAATCCGTTCGTCCGCTGGATGAAGCTGCTCGCGCGCATGGCCGTGCGGCTCGTGCCCGAATACATC
GTGCTCGTGCTGCTGCTCGGCGCCGCGCGCGCGTGGCTGTTCCCGCATATCGGCCCGGACATCGGCAATCACCTCGGCTG
GATCGTCGCGTTCGCGGTCGCGGGCATGCTGTTCGTGATCCCGACGGCCGGCGAGGTGCCGATCATCCAGGCGATGCTGT
CGCTCGGCATGGGCGTCGGTCCGGCCGCCGCGCTGCTGATGACGCTGCCGCCGATCAGCGTGCCGTCGCTCGCGATGCTC
GCGCGTTCGTTCAAGCCTTACATGCTGGCGATCGTCGCGACGCTCGTCGTCGCATTCGGGATCGTGAGCGGCTTGCTTGC
GATCGCGTTCGGGTTCTGA

Upstream 100 bases:

>100_bases
GGCTGCTGGCCGAACTTGCGCAAGCCGGGTTGCCCGCATCGGCCGCGCTCGCCGCCGGCACGACATCCGAAACCGACAAA
GACCAATCGACCACCACACG

Downstream 100 bases:

>100_bases
CGACGCGGGCGACACGCCGGCCCGGCGCAATCGTCGCATTCGTATTCATCCGGCGCCACCGCTTCACGTGTGCGGCGCCC
TTTACAAGAAGCAAACAGGA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSAAAPEPSLKAALDYAWAYGKAIWQA
MVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAA
LVFMGFVLGWHWSALRLVLGIAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNPFVRWMKLLARMAVRLVPEYI
VLVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGMLFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAML
ARSFKPYMLAIVATLVVAFGIVSGLLAIAFGF

Sequences:

>Translated_352_residues
MTTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSAAAPEPSLKAALDYAWAYGKAIWQA
MVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAA
LVFMGFVLGWHWSALRLVLGIAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNPFVRWMKLLARMAVRLVPEYI
VLVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGMLFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAML
ARSFKPYMLAIVATLVVAFGIVSGLLAIAFGF
>Mature_351_residues
TTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSAAAPEPSLKAALDYAWAYGKAIWQAM
VLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAAL
VFMGFVLGWHWSALRLVLGIAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNPFVRWMKLLARMAVRLVPEYIV
LVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGMLFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAMLA
RSFKPYMLAIVATLVVAFGIVSGLLAIAFGF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

Organism=Escherichia coli, GI1789541, Length=342, Percent_Identity=51.1695906432749, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 37114; Mature: 36983

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSAAAPE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHCCCCCCCC
PSLKAALDYAWAYGKAIWQAMVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHH
PGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAALVFMGFVLGWHWSALRLVLG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNPFVRWMKLLARMAVRLVPEYI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VLVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGMLFVIPTAGEVPIIQAMLSLGMGVG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
PAAALLMTLPPISVPSLAMLARSFKPYMLAIVATLVVAFGIVSGLLAIAFGF
HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSAAAPE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHCCCCCCCC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HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]