Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689593
Identifier: 116689593
GI number: 116689593
Start: 1733416
End: 1734312
Strand: Direct
Name: 116689593
Synonym: Bcen2424_1571
Alternate gene names: NA
Gene position: 1733416-1734312 (Clockwise)
Preceding gene: 116689590
Following gene: 116689594
Centisome position: 49.76
GC content: 55.18
Gene sequence:
>897_bases ATGAGGTTTGTTACGTCGTTGATTGTTTGCTTGGTAGCTTTAATGCCGATACTTTCGAGCGCGAAGATCCTTGGCTCAAA TGAAACGTTGTCGGCTGGAAATGTTGTCTACTCGGATAACGGCCAGTATCACCTTGCGATGCAAACGGACGGGAACTTGG TCGTCTATGGACCGACGGGCGCAGTATGGCAATCGCAGACATCGGGATCTGGCGGCAACAGGGCGGTAATGCAGGGCGAC GGAAATCTTGTCATTTATCGTGCCGACAACACGGCTGCATGGTCGTCCAAAACGGCGCATCCGGGCGCGTTCCTCGCAGT GCAGGATGACGGGAACGTGGTGATCTACTGGCCCCGTCCGGCCTGGGCAAGTAATACCAGTGATCCCGCGACCCAACAAT CGGCCGAGAGCAAATATCTAGCTTCGGGCTCCACGATGTCGGCTGGTCAAACTGTCACTGTCGCCCAATACATGCTCGTG TTTCAGGCGGACGGCAACCTCGTTCTTTATAAGAATGGCGGTAATCCGATTTGGTCGACTGGCACTCAGGGAAAAGGTGC TACGTATGCTGTTATGCAGAGCGACGGAAATTTTGTAATTTATGCAGGATCGACGGCTCTTTGGTCGACTAAGACTAACG GAGCCAATGGAGCGCAACTCGTTTTACAATCGGATGGCAACCTGGTGATTTACGCGCCGACAGCGGCATGGAGTACAAAG TTTGGCCTGGTTACGGCTCCGACATCGACGTCGACATCGAATAACGGGCCGGGCAGCGGTATCTGTGTCGGTGTTTGCCC GCCGCACCCCCTCAACGGAAATCCTTTTTCGCCCGTCGGCGTTGGTACAACCGGCCTCGGGTTCCCGACACCGGGTTATC CGGGTGCCGCCTTCTGA
Upstream 100 bases:
>100_bases ATCAGAAAGGCACATCCTTGTGCTATTCTGCCGCTGCAACAAACTGTAACGATCACGAATCCAACATGGATTTATCTAAA ACCATTACCTAGGGGTTGCT
Downstream 100 bases:
>100_bases CTTTGCTGACCAAACCCTTCAGTCGACCTGACTGAGAGCGGAACAAAAGTGCCGTCAGAGTTCGTTAATGGTTGCCTCGG GCGAGGCGTAATTTCGAACT
Product: curculin domain-containing protein
Products: NA
Alternate protein names: Curculin Domain Protein Lectin; Peptidase; Curculin Domain-Containing Protein Lectin; Glucosylceramidase; Dyp-Type Peroxidase; Curculin Domain Containing Protein Lectin; Mannose-Specific Lectin; Curculin-Like Lectin; NLP/P60 Protein; Proteinase Inhibitor
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRFVTSLIVCLVALMPILSSAKILGSNETLSAGNVVYSDNGQYHLAMQTDGNLVVYGPTGAVWQSQTSGSGGNRAVMQGD GNLVIYRADNTAAWSSKTAHPGAFLAVQDDGNVVIYWPRPAWASNTSDPATQQSAESKYLASGSTMSAGQTVTVAQYMLV FQADGNLVLYKNGGNPIWSTGTQGKGATYAVMQSDGNFVIYAGSTALWSTKTNGANGAQLVLQSDGNLVIYAPTAAWSTK FGLVTAPTSTSTSNNGPGSGICVGVCPPHPLNGNPFSPVGVGTTGLGFPTPGYPGAAF
Sequences:
>Translated_298_residues MRFVTSLIVCLVALMPILSSAKILGSNETLSAGNVVYSDNGQYHLAMQTDGNLVVYGPTGAVWQSQTSGSGGNRAVMQGD GNLVIYRADNTAAWSSKTAHPGAFLAVQDDGNVVIYWPRPAWASNTSDPATQQSAESKYLASGSTMSAGQTVTVAQYMLV FQADGNLVLYKNGGNPIWSTGTQGKGATYAVMQSDGNFVIYAGSTALWSTKTNGANGAQLVLQSDGNLVIYAPTAAWSTK FGLVTAPTSTSTSNNGPGSGICVGVCPPHPLNGNPFSPVGVGTTGLGFPTPGYPGAAF >Mature_298_residues MRFVTSLIVCLVALMPILSSAKILGSNETLSAGNVVYSDNGQYHLAMQTDGNLVVYGPTGAVWQSQTSGSGGNRAVMQGD GNLVIYRADNTAAWSSKTAHPGAFLAVQDDGNVVIYWPRPAWASNTSDPATQQSAESKYLASGSTMSAGQTVTVAQYMLV FQADGNLVLYKNGGNPIWSTGTQGKGATYAVMQSDGNFVIYAGSTALWSTKTNGANGAQLVLQSDGNLVIYAPTAAWSTK FGLVTAPTSTSTSNNGPGSGICVGVCPPHPLNGNPFSPVGVGTTGLGFPTPGYPGAAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30649; Mature: 30649
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS50927 BULB_LECTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVTSLIVCLVALMPILSSAKILGSNETLSAGNVVYSDNGQYHLAMQTDGNLVVYGPTG CHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCEEECCCCCEEEEEECCCCEEEECCCC AVWQSQTSGSGGNRAVMQGDGNLVIYRADNTAAWSSKTAHPGAFLAVQDDGNVVIYWPRP CEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCC AWASNTSDPATQQSAESKYLASGSTMSAGQTVTVAQYMLVFQADGNLVLYKNGGNPIWST CCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEECC GTQGKGATYAVMQSDGNFVIYAGSTALWSTKTNGANGAQLVLQSDGNLVIYAPTAAWSTK CCCCCCEEEEEEECCCCEEEEECCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCC FGLVTAPTSTSTSNNGPGSGICVGVCPPHPLNGNPFSPVGVGTTGLGFPTPGYPGAAF CCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFVTSLIVCLVALMPILSSAKILGSNETLSAGNVVYSDNGQYHLAMQTDGNLVVYGPTG CHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCEEECCCCCEEEEEECCCCEEEECCCC AVWQSQTSGSGGNRAVMQGDGNLVIYRADNTAAWSSKTAHPGAFLAVQDDGNVVIYWPRP CEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCC AWASNTSDPATQQSAESKYLASGSTMSAGQTVTVAQYMLVFQADGNLVLYKNGGNPIWST CCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEECC GTQGKGATYAVMQSDGNFVIYAGSTALWSTKTNGANGAQLVLQSDGNLVIYAPTAAWSTK CCCCCCEEEEEEECCCCEEEEECCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCC FGLVTAPTSTSTSNNGPGSGICVGVCPPHPLNGNPFSPVGVGTTGLGFPTPGYPGAAF CCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA