Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689552

Identifier: 116689552

GI number: 116689552

Start: 1692416

End: 1693126

Strand: Direct

Name: 116689552

Synonym: Bcen2424_1530

Alternate gene names: NA

Gene position: 1692416-1693126 (Clockwise)

Preceding gene: 116689551

Following gene: 116689554

Centisome position: 48.58

GC content: 66.67

Gene sequence:

>711_bases
ATGAGCCATATGACGGGGTTGGGGCGGGTGAGCGTATTGCTGCTCGCCATGGTGGGAGGCATGCAAGGCGCGTTCGCGCA
GGGGCTGGCGGGCGGCGATCCGTCGGCGGTGCAGCAGGCGTCGGCGCCGGTGGCCGCGATTCCGGTGATCGATTCGCAGG
CACAGACGTCGGTGCAGCCGCAGGCCGGCGAGACGACGGGGCCGAGCACGGTCGACGACTTGCAGCGCCAGATCCAGGCG
CACTCGCTGACGGAAATGCGCACGAGCTACAACGGCAGCTACGGCGCCAGCCTGCTGTTCAACGTCAAGGATGGTGCGTA
TTTCGTCGCGTTGTTCCAGCAGAAGGCGTTCTGGCGCGTGATCAAGACTTACGACGAAACGCGTGCGGAAGCGATCTATC
GCGATTTCTCGCACCAGGCGGAGCGTCTGGCCGTCAACGAGTTGCGGGCGGCGAAGCTGGAATCGCAGAAGGCGCAAATG
GACAAGCAGATCGAGGTCACGCAGGACCGCGCGCGGCGCCTGCAGGCGGACATCTCGATCGCCCGCCAGCAGCAGGCGGC
GGTGGCGGATCGCCAGAAGAGCGTGCGGAGCGAAACGGCGGCATTGCAGGCGCAACAGGCTCAACTCCAGTCGCAACTGC
GGGCGTTGCAGCAGCAGGTGCGTTCGCTGCAGCGCGAGGCTGACGCAGGCCTGCCGACGACGGCACGCTGA

Upstream 100 bases:

>100_bases
ATATCAGATCTTCGACGAAGAGCCCGAGACCCGCGAAAGTGAGTAATTAATGAGATAAAATCGCGGTGAATTACAACGAC
TCGGGCGGGAATAAAACTTC

Downstream 100 bases:

>100_bases
ACCCGGTAACGACGGTGCGGCGACGTGCCGCGCCGGCCGTACAAGTGAAAAGGGCAAGCCGGTTGGCTTGCCCTTTTTGT
TTTACTGGCCGTCCGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Exported Lipoprotein; Molecular Chaperone; Exported Protein

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSHMTGLGRVSVLLLAMVGGMQGAFAQGLAGGDPSAVQQASAPVAAIPVIDSQAQTSVQPQAGETTGPSTVDDLQRQIQA
HSLTEMRTSYNGSYGASLLFNVKDGAYFVALFQQKAFWRVIKTYDETRAEAIYRDFSHQAERLAVNELRAAKLESQKAQM
DKQIEVTQDRARRLQADISIARQQQAAVADRQKSVRSETAALQAQQAQLQSQLRALQQQVRSLQREADAGLPTTAR

Sequences:

>Translated_236_residues
MSHMTGLGRVSVLLLAMVGGMQGAFAQGLAGGDPSAVQQASAPVAAIPVIDSQAQTSVQPQAGETTGPSTVDDLQRQIQA
HSLTEMRTSYNGSYGASLLFNVKDGAYFVALFQQKAFWRVIKTYDETRAEAIYRDFSHQAERLAVNELRAAKLESQKAQM
DKQIEVTQDRARRLQADISIARQQQAAVADRQKSVRSETAALQAQQAQLQSQLRALQQQVRSLQREADAGLPTTAR
>Mature_235_residues
SHMTGLGRVSVLLLAMVGGMQGAFAQGLAGGDPSAVQQASAPVAAIPVIDSQAQTSVQPQAGETTGPSTVDDLQRQIQAH
SLTEMRTSYNGSYGASLLFNVKDGAYFVALFQQKAFWRVIKTYDETRAEAIYRDFSHQAERLAVNELRAAKLESQKAQMD
KQIEVTQDRARRLQADISIARQQQAAVADRQKSVRSETAALQAQQAQLQSQLRALQQQVRSLQREADAGLPTTAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25701; Mature: 25570

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHMTGLGRVSVLLLAMVGGMQGAFAQGLAGGDPSAVQQASAPVAAIPVIDSQAQTSVQP
CCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCHHHCCCC
QAGETTGPSTVDDLQRQIQAHSLTEMRTSYNGSYGASLLFNVKDGAYFVALFQQKAFWRV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
IKTYDETRAEAIYRDFSHQAERLAVNELRAAKLESQKAQMDKQIEVTQDRARRLQADISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQQQAAVADRQKSVRSETAALQAQQAQLQSQLRALQQQVRSLQREADAGLPTTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SHMTGLGRVSVLLLAMVGGMQGAFAQGLAGGDPSAVQQASAPVAAIPVIDSQAQTSVQP
CCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCHHHCCCC
QAGETTGPSTVDDLQRQIQAHSLTEMRTSYNGSYGASLLFNVKDGAYFVALFQQKAFWRV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
IKTYDETRAEAIYRDFSHQAERLAVNELRAAKLESQKAQMDKQIEVTQDRARRLQADISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQQQAAVADRQKSVRSETAALQAQQAQLQSQLRALQQQVRSLQREADAGLPTTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA