Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689554
Identifier: 116689554
GI number: 116689554
Start: 1694082
End: 1694366
Strand: Direct
Name: 116689554
Synonym: Bcen2424_1532
Alternate gene names: NA
Gene position: 1694082-1694366 (Clockwise)
Preceding gene: 116689552
Following gene: 116689559
Centisome position: 48.63
GC content: 63.16
Gene sequence:
>285_bases ATGAACAAGAGGCAAGTAGCAGCGGTGATCGGGAGCACGGCGTTGCTCGTTTCCGGTAGCGCAATGGCGGGGCACGTCGA CCTGTCGGTCGGCATCGGCGTCCCGGTCGCACCGGTCTATGTCGAGCCGGCGCCGGTCTATGTGGCGCCGCAGCCGGCCA TCGTCGCCTATCCGGGCTATGGGTATGGCTATTACGGGGATGACGACGACGATCGCTACCGCAAGTGGCGCAAGCACTAT TACAAGCACTGGCGTCGACACCACGGCGACGACGATGACGATTGA
Upstream 100 bases:
>100_bases TCGCGTTACGACTCTCGCAGCCCCGTATCACCTGGGTGCGCGCGCCGCGCTTACATTGACCGCGTGAACCGGGCGGGCCG GCTTATCAGGGATGCGGAGC
Downstream 100 bases:
>100_bases GCCCGTGACCGCCCCGCCGGCGCGCGTCAGAACGCGTAGTCGGGGTTTTTCGGGTCGAATGCGGTGTCGTCGAGGGTCGC CGGCGCGATTTTCTCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MNKRQVAAVIGSTALLVSGSAMAGHVDLSVGIGVPVAPVYVEPAPVYVAPQPAIVAYPGYGYGYYGDDDDDRYRKWRKHY YKHWRRHHGDDDDD
Sequences:
>Translated_94_residues MNKRQVAAVIGSTALLVSGSAMAGHVDLSVGIGVPVAPVYVEPAPVYVAPQPAIVAYPGYGYGYYGDDDDDRYRKWRKHY YKHWRRHHGDDDDD >Mature_94_residues MNKRQVAAVIGSTALLVSGSAMAGHVDLSVGIGVPVAPVYVEPAPVYVAPQPAIVAYPGYGYGYYGDDDDDRYRKWRKHY YKHWRRHHGDDDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10465; Mature: 10465
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRQVAAVIGSTALLVSGSAMAGHVDLSVGIGVPVAPVYVEPAPVYVAPQPAIVAYPGY CCCHHEEHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEECCCCCEEEECCC GYGYYGDDDDDRYRKWRKHYYKHWRRHHGDDDDD CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNKRQVAAVIGSTALLVSGSAMAGHVDLSVGIGVPVAPVYVEPAPVYVAPQPAIVAYPGY CCCHHEEHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEECCCCCEEEECCC GYGYYGDDDDDRYRKWRKHYYKHWRRHHGDDDDD CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA