Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689544
Identifier: 116689544
GI number: 116689544
Start: 1683355
End: 1684593
Strand: Direct
Name: 116689544
Synonym: Bcen2424_1522
Alternate gene names: NA
Gene position: 1683355-1684593 (Clockwise)
Preceding gene: 116689543
Following gene: 116689545
Centisome position: 48.32
GC content: 69.17
Gene sequence:
>1239_bases ATGAATGCGAGAACCTACTCTTTGGCTGAGCCCGCCGTCACCGACCACTTCGTCTGCGCATCCTCGCTTGCGGAGCATGT GCACTGGCTGTCGCAATCGCTGGTGGCCGCCGGCGCGGTCGAAGGGGTGCCGCTCGATGGCGCCGCGCTGTCGCAGCGCA TCGGCGTGTTGAATCCGGCACTGGTGTTCATCGATTTTTCCGGTGACTGCGCGGCGGCAAGCACGGTGGTCGCCGCGGTA CGCGCGGCACATCCGGGCGTGCCGGTCGTCGCACTGGGCTCGCTCGCGCAGCCGGAAGGGGCGCTCGCCGCGCTGCGTGC GGGCGTGCGAGATTTCGTCGATTTCTCCGCACCAGCCGACGAAGCGCTGCGGATCACGCGCGTGTTGCTCGACAACGTGG GCGAGCCGGCCAATCGTCACGGAAAGGTCACCGCGTTGCTCGGCGCGCGTGCCGGAATGGGCGTGAGCACACTCGCCGCG AACCTGTCGGTGCTGATGCAGCGGCGGCCGGCCGACCCCGCGCGCACAGCGGCGCTGCTCGATCTCGGGCTGCCGGCCGG CGACGGCGCGTTGTTCCTGAACACGCGCTGCGAATTCCATTTCGTCGAGGCGGTGCGCAACCTGCGCCGGATCGACCGCA CGTTCGTGACCACCGCACTCGCGCGCCATTCGAGCGGCGTCGCGCTGACGACGCTGCCACCGAATCTCGCCGAGCTGCGC GACGTGGCGACAGCGTCGTGCGCGGCGTTGCTGAACCGGCTGCGGGCGTTCTTCGATCACCAGATCGTCGATCTCGGCGG CTTCCCGAATCGCGAATTCATTGCGCAGGTCGTGAACCTCGCGGACGAAGCGTGGCTCGTTTGCGATCAGGGCGTGGCAT CGGTCGTATCGGCGGTCGAGATGCTGGACGGGTTGCGCGAGGCAGGCGCCGCGACCGACCGGATCCGGCTCGTCGTCAAC CAGTTCGATGCCGAGCTCGGGCTGATGCCCGCGCAGATCGCCGAACGGCTCGATCTGTCGCTGCTCGCGACGCTGCCGTC GCGGCGCGTGTCGATCGGGCACGCGGCGAACCAGGGCAAGCTGATCGCCGAGGTCGCGGAACGCGACCCGTACGTTCGTG CGCTCGGGCCGCTGGTCGAGCGCCTCGCGGGCGCGCCGGCACCGGGAGCGGCACAGCGTGCGGCCGGCGGCCTCTCGGCG CTCAAGCGAATCATTCAATCCTCTACGAAGCGGTCGTAA
Upstream 100 bases:
>100_bases CGCAGGGCCGGGGTTCTCGAAATGAGCGCGCCGAATCGTTACCGGACCGCGCAGGCCGTCGCGCACGACGCGATGCCTTG CTTCATTGGGAGTATCCAAG
Downstream 100 bases:
>100_bases GCGATGGCACACGACATTCAATTTGCCGACGGCGCAGCGCCGTTCTCGCAAACGCAACAGTTCCACGACATCAAGAATGC CGCGCACGAGCATCTGCTCA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Pilus Assembly Protein; Response Receiver Involved In Pilum Assembly; Flp Pilus Assembly ATPase; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Fimbriae Assembly Protein; Response Regulator; Flp Pilus Assembly Protein ATPase CpaE-Like; Pilus Assembly Protein CpaE-Like Protein; Septum Site-Determining Protein; Pilus Assembly Protein CpaE-Like; Type II Secretion System Protein; Flp Pilus Assembly Protein ATPase; Flp Pilus Assembly Protein ATPase CpaE
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNARTYSLAEPAVTDHFVCASSLAEHVHWLSQSLVAAGAVEGVPLDGAALSQRIGVLNPALVFIDFSGDCAAASTVVAAV RAAHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPADEALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAA NLSVLMQRRPADPARTAALLDLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHSSGVALTTLPPNLAELR DVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAVEMLDGLREAGAATDRIRLVVN QFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGKLIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSA LKRIIQSSTKRS
Sequences:
>Translated_412_residues MNARTYSLAEPAVTDHFVCASSLAEHVHWLSQSLVAAGAVEGVPLDGAALSQRIGVLNPALVFIDFSGDCAAASTVVAAV RAAHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPADEALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAA NLSVLMQRRPADPARTAALLDLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHSSGVALTTLPPNLAELR DVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAVEMLDGLREAGAATDRIRLVVN QFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGKLIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSA LKRIIQSSTKRS >Mature_412_residues MNARTYSLAEPAVTDHFVCASSLAEHVHWLSQSLVAAGAVEGVPLDGAALSQRIGVLNPALVFIDFSGDCAAASTVVAAV RAAHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPADEALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAA NLSVLMQRRPADPARTAALLDLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHSSGVALTTLPPNLAELR DVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAVEMLDGLREAGAATDRIRLVVN QFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGKLIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSA LKRIIQSSTKRS
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43097; Mature: 43097
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTYSLAEPAVTDHFVCASSLAEHVHWLSQSLVAAGAVEGVPLDGAALSQRIGVLNPA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCE LVFIDFSGDCAAASTVVAAVRAAHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPAD EEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH EALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAANLSVLMQRRPADPARTAALL HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH DLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHSSGVALTTLPPNLAELR HCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH DVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAVE HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH MLDGLREAGAATDRIRLVVNQFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGK HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCH LIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSALKRIIQSSTKRS HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNARTYSLAEPAVTDHFVCASSLAEHVHWLSQSLVAAGAVEGVPLDGAALSQRIGVLNPA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCE LVFIDFSGDCAAASTVVAAVRAAHPGVPVVALGSLAQPEGALAALRAGVRDFVDFSAPAD EEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH EALRITRVLLDNVGEPANRHGKVTALLGARAGMGVSTLAANLSVLMQRRPADPARTAALL HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH DLGLPAGDGALFLNTRCEFHFVEAVRNLRRIDRTFVTTALARHSSGVALTTLPPNLAELR HCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH DVATASCAALLNRLRAFFDHQIVDLGGFPNREFIAQVVNLADEAWLVCDQGVASVVSAVE HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH MLDGLREAGAATDRIRLVVNQFDAELGLMPAQIAERLDLSLLATLPSRRVSIGHAANQGK HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCH LIAEVAERDPYVRALGPLVERLAGAPAPGAAQRAAGGLSALKRIIQSSTKRS HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA