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The map label for this gene is hofQ [C]

Identifier: 116689543

GI number: 116689543

Start: 1681948

End: 1683279

Strand: Direct

Name: hofQ [C]

Synonym: Bcen2424_1521

Alternate gene names: 116689543

Gene position: 1681948-1683279 (Clockwise)

Preceding gene: 116689542

Following gene: 116689544

Centisome position: 48.28

GC content: 66.52

Gene sequence:

>1332_bases
ATGAAAAAGAAACTGATTGGTTTGGCTATTGCATTGAGCGCGCTGGCGATGCCGCCGCTGTCGGACGCGGCCGACACGAG
CGGCACGATCAGCCTTGCGATCGGCGCGCAGCGGCAGATTGCGACGGGGCGGGCGCTGCAGCGGGTCGCGGTGGGTGACC
CTTCGGTGGCCGACGTGCTCGTCGTGAAGGGCGGGCGTGGCGGCGTGCTGCTGGTGGCGAAGAACGCCGGCGCGACGAAC
GTGATGATCTGGGAGCGCGGCCGCGACGAGCCGACCGTCTATAACGTGAACGTCACGAGCGGTGCGGCGCGTGCACTGCT
CGACGGAACGTCGCCGAGCGTGAACACGTATGGCGGCACGACGGTGATCGGCGGTGCGGCCGGAACGCTCGACGGGCATC
AGCGGGCGGTCCATGCGGCGAAGACGGTCGGCGGCAAGGACGGGACGACGCTCGATGCGTCGACGATTTCCGGCAAGAAC
GTCGTGCAGGTCGATGTGCGGGTCGTCGAATTCAGCCGTTCGGTGCTGAAGCAGGCGGGCCTGAACTTCTTCAAGCAGAG
CAACGGCTTTGCGTTCGGCGCCTTCGCGCCGACGGGGCTCACCTCGATTACCGGTACGCCGGGCGGCTCGCTCACCTACA
ACACGAGCGTACCGATTTCGTCGGCGTTCAACCTCGTCGTCAATTCGGTGTCGCGCGGATTGTTCGCTGACCTGTCGATT
CTCGAGGCGAACAACCTGGCGCGCGTGCTCGCACAGCCGACGCTCGTCGCGTTGTCCGGCCAGAGCGCGAACTTCCTCGC
GGGCGGCGAAATCCCGGTGCCGGTGCCGCAATCGCTCGGCACGATCTCGATCGAATGGAAGCCCTACGGCGTCGGGCTCA
CGGTCACGCCGACCGTGCTGAGTCCGCGGCGGATCGCGCTGAAGGTTGCGCCCGAGTCGAGCCAGCTCGACTTCGTGCAT
TCGATCACGATCAACAGCGTGCAGGTGCCCGCGCTGACGACGCGGCGCGCGGACACGACAGTCGAGCTCGGCGACGGCGA
AAGCTTCGTGATCGGCGGCCTGATCGACCGCGAAACCACGTCCAACGTCAACAAGGTGCCGTTCCTGGGCGATCTGCCCA
TCATCGGCGCGTTTTTCAAGAATCTGAGCTACCAGCAGAACGACAAGGAGCTCGTGATCATCGTGACGCCGCATCTCGTT
GCGCCGATCGCGCAGGGCGCGCCGCTGCCGGCGACGCCGGGCGAGCTGTCCGAGCAGCGCGACGGTCCGGTGTGGCGTTC
GTACCTGGGCGGCATGGCATCGCCGGACGCAGGGCCGGGGTTCTCGAAATGA

Upstream 100 bases:

>100_bases
CGGGTGGTCGCGCGGCATCCGAGCGGCGGCAGCATCGAAGTGATTCGGGGTGGGCGGACCGAAACGGTCGCTTATTGAGC
GGGACGACGACGGCAAAACA

Downstream 100 bases:

>100_bases
GCGCGCCGAATCGTTACCGGACCGCGCAGGCCGTCGCGCACGACGCGATGCCTTGCTTCATTGGGAGTATCCAAGATGAA
TGCGAGAACCTACTCTTTGG

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKKKLIGLAIALSALAMPPLSDAADTSGTISLAIGAQRQIATGRALQRVAVGDPSVADVLVVKGGRGGVLLVAKNAGATN
VMIWERGRDEPTVYNVNVTSGAARALLDGTSPSVNTYGGTTVIGGAAGTLDGHQRAVHAAKTVGGKDGTTLDASTISGKN
VVQVDVRVVEFSRSVLKQAGLNFFKQSNGFAFGAFAPTGLTSITGTPGGSLTYNTSVPISSAFNLVVNSVSRGLFADLSI
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVLSPRRIALKVAPESSQLDFVH
SITINSVQVPALTTRRADTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQNDKELVIIVTPHLV
APIAQGAPLPATPGELSEQRDGPVWRSYLGGMASPDAGPGFSK

Sequences:

>Translated_443_residues
MKKKLIGLAIALSALAMPPLSDAADTSGTISLAIGAQRQIATGRALQRVAVGDPSVADVLVVKGGRGGVLLVAKNAGATN
VMIWERGRDEPTVYNVNVTSGAARALLDGTSPSVNTYGGTTVIGGAAGTLDGHQRAVHAAKTVGGKDGTTLDASTISGKN
VVQVDVRVVEFSRSVLKQAGLNFFKQSNGFAFGAFAPTGLTSITGTPGGSLTYNTSVPISSAFNLVVNSVSRGLFADLSI
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVLSPRRIALKVAPESSQLDFVH
SITINSVQVPALTTRRADTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQNDKELVIIVTPHLV
APIAQGAPLPATPGELSEQRDGPVWRSYLGGMASPDAGPGFSK
>Mature_443_residues
MKKKLIGLAIALSALAMPPLSDAADTSGTISLAIGAQRQIATGRALQRVAVGDPSVADVLVVKGGRGGVLLVAKNAGATN
VMIWERGRDEPTVYNVNVTSGAARALLDGTSPSVNTYGGTTVIGGAAGTLDGHQRAVHAAKTVGGKDGTTLDASTISGKN
VVQVDVRVVEFSRSVLKQAGLNFFKQSNGFAFGAFAPTGLTSITGTPGGSLTYNTSVPISSAFNLVVNSVSRGLFADLSI
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVLSPRRIALKVAPESSQLDFVH
SITINSVQVPALTTRRADTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQNDKELVIIVTPHLV
APIAQGAPLPATPGELSEQRDGPVWRSYLGGMASPDAGPGFSK

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=171, Percent_Identity=35.0877192982456, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082242, Length=168, Percent_Identity=30.3571428571429, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 45657; Mature: 45657

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLIGLAIALSALAMPPLSDAADTSGTISLAIGAQRQIATGRALQRVAVGDPSVADVL
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCEEEE
VVKGGRGGVLLVAKNAGATNVMIWERGRDEPTVYNVNVTSGAARALLDGTSPSVNTYGGT
EEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCHHHHEECCCCCCCCCCCCE
TVIGGAAGTLDGHQRAVHAAKTVGGKDGTTLDASTISGKNVVQVDVRVVEFSRSVLKQAG
EEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEHHHHHHHHHHC
LNFFKQSNGFAFGAFAPTGLTSITGTPGGSLTYNTSVPISSAFNLVVNSVSRGLFADLSI
CHHEECCCCEEEECCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEEEE
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVL
EECCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECEEEECCCC
SPRRIALKVAPESSQLDFVHSITINSVQVPALTTRRADTTVELGDGESFVIGGLIDRETT
CCCEEEEEECCCCCCCEEEEEEEECCEECCEEEECCCCCEEEECCCCEEEEEEEECCCCC
SNVNKVPFLGDLPIIGAFFKNLSYQQNDKELVIIVTPHLVAPIAQGAPLPATPGELSEQR
CCCCCCCEECCCHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCHHCC
DGPVWRSYLGGMASPDAGPGFSK
CCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKLIGLAIALSALAMPPLSDAADTSGTISLAIGAQRQIATGRALQRVAVGDPSVADVL
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCEEEE
VVKGGRGGVLLVAKNAGATNVMIWERGRDEPTVYNVNVTSGAARALLDGTSPSVNTYGGT
EEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCHHHHEECCCCCCCCCCCCE
TVIGGAAGTLDGHQRAVHAAKTVGGKDGTTLDASTISGKNVVQVDVRVVEFSRSVLKQAG
EEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEHHHHHHHHHHC
LNFFKQSNGFAFGAFAPTGLTSITGTPGGSLTYNTSVPISSAFNLVVNSVSRGLFADLSI
CHHEECCCCEEEECCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEEEE
LEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTISIEWKPYGVGLTVTPTVL
EECCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECEEEECCCC
SPRRIALKVAPESSQLDFVHSITINSVQVPALTTRRADTTVELGDGESFVIGGLIDRETT
CCCEEEEEECCCCCCCEEEEEEEECCEECCEEEECCCCCEEEECCCCEEEEEEEECCCCC
SNVNKVPFLGDLPIIGAFFKNLSYQQNDKELVIIVTPHLVAPIAQGAPLPATPGELSEQR
CCCCCCCEECCCHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCHHCC
DGPVWRSYLGGMASPDAGPGFSK
CCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]