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The map label for this gene is hofB [C]

Identifier: 116689545

GI number: 116689545

Start: 1684597

End: 1685949

Strand: Direct

Name: hofB [C]

Synonym: Bcen2424_1523

Alternate gene names: 116689545

Gene position: 1684597-1685949 (Clockwise)

Preceding gene: 116689544

Following gene: 116689546

Centisome position: 48.35

GC content: 64.52

Gene sequence:

>1353_bases
ATGGCACACGACATTCAATTTGCCGACGGCGCAGCGCCGTTCTCGCAAACGCAACAGTTCCACGACATCAAGAATGCCGC
GCACGAGCATCTGCTCACGCGGATCGAGGAACTGGGTGCCGAATTCGGCCGTTGGTCGCGACAGGCGATCAACCAGTTCG
TCGATCTCGAAATCGACAGCTTCGTGCGGTTGCGGCGCATCCCGCTCAACGAGAGCGAGGTGCGTGCGGTGGCCGAGGCG
CTGACGAAGGAGCTCGCCGGCTTCGGGCCGATCGAAGACCTGTTGGCGGACCCGCACGTCGAGGACATCCTGATCAACGG
CTACAACGACATCTACGTGTCGCGCCACGGGATCCTGTCGAAGCTGCCGATCCGCTTCACCGACAACGCGCATCTGCTGC
GGATCGTGCGACGGATTCTCGCGCCGGTCGGCCGGCGGCTTGACGAATCGAATCCGATGGTCGATGCACGGCTGCCCGAC
GGCGGGCGGGTCAACGTCGTGATCGAACCGTTGTCGATCGACGGCCCGGTCGTGTCGATCCGGAAGTTCCGCAAGGACCC
GCTGAAGCCCGAGGACCTGCTGGGCAACGGTACCTACAACGAGGAAATCGGCCGGTTGCTCGAGGCCGCGGTCGACGCGC
GTTGCAACGTGCTCGTGTCGGGCGGCACCAGTTCGGGCAAGACGTCGCTGCTGAACGCGCTGGCGTTCCACATCCCGATG
GCGGAACGCGTCGTGACGATCGAGGATACGGCCGAACTGTCGCTGAATCACCCGCACGTCGTGCGGCTCGAAAGTCGTCC
CGGCGGGTTCGACGGTAGTGGCGTCGTGACGATTCGCGACCTGCTGCGAAACACGCTGCGGATGCGGCCGGACCGGATCA
TCGTCGGCGAAGTGCGCGGCGGTGAGGTGCTCGAAATGCTGCAGGCGATGAATACCGGCCACGATGGATCGATGGGCACA
GTGCACGCCAGCTCGCCGCGCGAATGTTTGTACCGGCTCGAGATGCTGGCGGGTTTCGCCGGTTTTCAGGGGACCGAAGC
AAGCCTGCGACGGCAGATCGCCAACGCGATCGACTTCATCGTGCAGATCGGCCGGCTGTCCAACGGCCGCCGCCGCATCC
TGTCGATCACCGAAGTCACCGGCATGTCGGACAACATCGTATCGACGCAGGAGCTGTATCGCTACGAAGCGCGCGTCACG
CCGGAGGGCGAAGAGATCGATCATTGGGAATCGCTCGGCATTCATCCGCATTCGCCGAAGCTGGCGCGTTTCCGCAGCAC
GCTGGTGTCGGCGGGCGGCGGTGGCGGCGGGTTCGGTGGCAGCTTCGGGCGAGGCGGGGGCTTCAATGTCTAG

Upstream 100 bases:

>100_bases
CCTCGCGGGCGCGCCGGCACCGGGAGCGGCACAGCGTGCGGCCGGCGGCCTCTCGGCGCTCAAGCGAATCATTCAATCCT
CTACGAAGCGGTCGTAAGCG

Downstream 100 bases:

>100_bases
CGCCACCTTGCTCGCGCTGATGTTCGCGTTGATTTGTGCGGCGGCCGGGTTGCTGCTGTGGCGCGGAAGCCAGGTGCGGG
AAGGGCGTGCGCATGCGCAG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDSFVRLRRIPLNESEVRAVAEA
LTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILSKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPD
GGRVNVVIEPLSIDGPVVSIRKFRKDPLKPEDLLGNGTYNEEIGRLLEAAVDARCNVLVSGGTSSGKTSLLNALAFHIPM
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVT
PEGEEIDHWESLGIHPHSPKLARFRSTLVSAGGGGGGFGGSFGRGGGFNV

Sequences:

>Translated_450_residues
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDSFVRLRRIPLNESEVRAVAEA
LTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILSKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPD
GGRVNVVIEPLSIDGPVVSIRKFRKDPLKPEDLLGNGTYNEEIGRLLEAAVDARCNVLVSGGTSSGKTSLLNALAFHIPM
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVT
PEGEEIDHWESLGIHPHSPKLARFRSTLVSAGGGGGGFGGSFGRGGGFNV
>Mature_449_residues
AHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDSFVRLRRIPLNESEVRAVAEAL
TKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILSKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDG
GRVNVVIEPLSIDGPVVSIRKFRKDPLKPEDLLGNGTYNEEIGRLLEAAVDARCNVLVSGGTSSGKTSLLNALAFHIPMA
ERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGTV
HASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVTP
EGEEIDHWESLGIHPHSPKLARFRSTLVSAGGGGGGFGGSFGRGGGFNV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 49407; Mature: 49276

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FVRLRRIPLNESEVRAVAEALTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILS
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHEEECCCCEEEEECCCHHH
KLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDGGRVNVVIEPLSIDGPVVSI
HCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHH
RKFRKDPLKPEDLLGNGTYNEEIGRLLEAAVDARCNVLVSGGTSSGKTSLLNALAFHIPM
HHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCH
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRG
HHEEEEEECCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVTPEGEEIDHWESLGIHPHSPK
HHHHHCCCCCHHEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCH
LARFRSTLVSAGGGGGGFGGSFGRGGGFNV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEIDS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FVRLRRIPLNESEVRAVAEALTKELAGFGPIEDLLADPHVEDILINGYNDIYVSRHGILS
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHEEECCCCEEEEECCCHHH
KLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDGGRVNVVIEPLSIDGPVVSI
HCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHH
RKFRKDPLKPEDLLGNGTYNEEIGRLLEAAVDARCNVLVSGGTSSGKTSLLNALAFHIPM
HHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCH
AERVVTIEDTAELSLNHPHVVRLESRPGGFDGSGVVTIRDLLRNTLRMRPDRIIVGEVRG
HHEEEEEECCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTEASLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGMSDNIVSTQELYRYEARVTPEGEEIDHWESLGIHPHSPK
HHHHHCCCCCHHEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCH
LARFRSTLVSAGGGGGGFGGSFGRGGGFNV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]