Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689515
Identifier: 116689515
GI number: 116689515
Start: 1645244
End: 1645645
Strand: Reverse
Name: 116689515
Synonym: Bcen2424_1493
Alternate gene names: NA
Gene position: 1645645-1645244 (Counterclockwise)
Preceding gene: 116689525
Following gene: 116689514
Centisome position: 47.24
GC content: 68.16
Gene sequence:
>402_bases ATGATGCTGTTCGACGATTTGAGAGATAACGAATGGGCGCTGGTCGAGGGTCTGTTTTGCTCGGAGCCCGCACGGAGTGA GCGGCGTGGCCGCCCCCGCGTGGAAGCCCGATCGGTAGTCAATGCCGTGCTGTGGGTGCTGTCGACGGGTGAAGGCTGGT CGAAACTGCCGGGCCGCTATCCGTCCCCGCCGACCTGCCGCCGCCGCTTCGACGAATGGCAGGCGGACGGTACGCTCGCC GAAATCGTGAAACGACTCGGCACGAGCGGCCGTCAGATCTCGCTGCGCGGGCGCATCGGCGCAAGCGCGGCGAAGCCGCC CGCACCGCCGAGCCGCGACCGGCTGCGCGGCGCGTTCTGGACCAATCCGGAATCCTGGCGCGCGCCCGTCAAGATGGCGT AA
Upstream 100 bases:
>100_bases CGGCCAACCGGACGCCCCCACCCGGCACTCGACGATCGAGTGCTTGAAGAGTGCGCGGCGCAGGGCAGCGCACCGGAGTT AGCTTCGCTGAGGTGAGGAC
Downstream 100 bases:
>100_bases CGAATGCTCGATCGGGCGGCTTCGGCCGCCCGGTTTCTTTTTGCGACGCGACTTCGTTGCGACGCATGCCTTGCCGTCGA TTACCGTTGTCGTGCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase Protein; Transposase; ISAca3 Transposase OrfA; IS5 Family Transposase OrfA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MMLFDDLRDNEWALVEGLFCSEPARSERRGRPRVEARSVVNAVLWVLSTGEGWSKLPGRYPSPPTCRRRFDEWQADGTLA EIVKRLGTSGRQISLRGRIGASAAKPPAPPSRDRLRGAFWTNPESWRAPVKMA
Sequences:
>Translated_133_residues MMLFDDLRDNEWALVEGLFCSEPARSERRGRPRVEARSVVNAVLWVLSTGEGWSKLPGRYPSPPTCRRRFDEWQADGTLA EIVKRLGTSGRQISLRGRIGASAAKPPAPPSRDRLRGAFWTNPESWRAPVKMA >Mature_133_residues MMLFDDLRDNEWALVEGLFCSEPARSERRGRPRVEARSVVNAVLWVLSTGEGWSKLPGRYPSPPTCRRRFDEWQADGTLA EIVKRLGTSGRQISLRGRIGASAAKPPAPPSRDRLRGAFWTNPESWRAPVKMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14976; Mature: 14976
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLFDDLRDNEWALVEGLFCSEPARSERRGRPRVEARSVVNAVLWVLSTGEGWSKLPGRY CCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCC PSPPTCRRRFDEWQADGTLAEIVKRLGTSGRQISLRGRIGASAAKPPAPPSRDRLRGAFW CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCC TNPESWRAPVKMA CCCHHCCCCCCCC >Mature Secondary Structure MMLFDDLRDNEWALVEGLFCSEPARSERRGRPRVEARSVVNAVLWVLSTGEGWSKLPGRY CCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCC PSPPTCRRRFDEWQADGTLAEIVKRLGTSGRQISLRGRIGASAAKPPAPPSRDRLRGAFW CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCC TNPESWRAPVKMA CCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA