Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689514
Identifier: 116689514
GI number: 116689514
Start: 1644794
End: 1645045
Strand: Reverse
Name: 116689514
Synonym: Bcen2424_1492
Alternate gene names: NA
Gene position: 1645045-1644794 (Counterclockwise)
Preceding gene: 116689515
Following gene: 116689512
Centisome position: 47.22
GC content: 65.87
Gene sequence:
>252_bases ATGAAAACAATGTCACTGCTCGTTGCATGCGGCATTGTCGTTTCCGTGGTGCTGACCACTCCCGTCCATGCCGACGATCG GGTGAAACCGCCGCATCGCCAGCCGGATCACCGCAACACCCTCCGCCAGCCGCCGTCCGCCAACCCGCCCAGCCGGCAAA CCGTGCCACGCGGCGACTTGCGCGGCGACATCGCCAGCAACGCGCGAGCACGGATTGGCTCACAGCCACCGGGCATGTCG CGTCATCCGTAG
Upstream 100 bases:
>100_bases GAAACATCTATTTACTAATATTTACAGCAAGCCTGCACTCCCACGCTTACCTTAGCGTCATATCAACAGGCCGCACTGAC GGCTTGAAGGGAGCCCCGCC
Downstream 100 bases:
>100_bases TCCTGCCGATTTCGAGATTTCGCCAAAGAAAATGCCGGTATCCGGGAACTGCGCCCCATGCGGCGGGTCACATCGTTGCC ATGAGCACAGCGTGGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MKTMSLLVACGIVVSVVLTTPVHADDRVKPPHRQPDHRNTLRQPPSANPPSRQTVPRGDLRGDIASNARARIGSQPPGMS RHP
Sequences:
>Translated_83_residues MKTMSLLVACGIVVSVVLTTPVHADDRVKPPHRQPDHRNTLRQPPSANPPSRQTVPRGDLRGDIASNARARIGSQPPGMS RHP >Mature_83_residues MKTMSLLVACGIVVSVVLTTPVHADDRVKPPHRQPDHRNTLRQPPSANPPSRQTVPRGDLRGDIASNARARIGSQPPGMS RHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9002; Mature: 9002
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTMSLLVACGIVVSVVLTTPVHADDRVKPPHRQPDHRNTLRQPPSANPPSRQTVPRGDL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGDIASNARARIGSQPPGMSRHP CCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MKTMSLLVACGIVVSVVLTTPVHADDRVKPPHRQPDHRNTLRQPPSANPPSRQTVPRGDL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGDIASNARARIGSQPPGMSRHP CCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA