Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689512
Identifier: 116689512
GI number: 116689512
Start: 1643402
End: 1644076
Strand: Reverse
Name: 116689512
Synonym: Bcen2424_1490
Alternate gene names: NA
Gene position: 1644076-1643402 (Counterclockwise)
Preceding gene: 116689514
Following gene: 116689511
Centisome position: 47.19
GC content: 65.93
Gene sequence:
>675_bases ATGCTCTGCCGCAAGCAGCGTCGAACCATTTCGATCGTCGCCGCCGCGCTGTTCTGGCTGCTGGCGACGGGCTGGCTCGC AGCCCCGCTGATCGCCTGGAGCGAGGCCGGCGTCACGCCGGTCGAGCATCCCGACATGCACGGGCGAACCACGCTGATCC TGATCGGCGCCGGCACGCACCGCACCGACACCGGAGTGCAGCCACCGCCCGACGGCGTCGCGCGCATCCACAAGGTTGCG GCACTCTATCGCACGTGCCGGCAGCAGGCCGAACGCTGCACCGTGGTGATGTCGGGCGGCGACCCGCAGCATCACGGCGA CACCGAGGCAGCCGTCTACGGACGCCAACTCGTCGCTGAAGGTGTGGCGCCGGCCGACCTCGTGCTCGAACCGAACAGCC GCACAACCTACGAAAACGCGAAATTCACTGCATCTATACTACGCTCACAGTATGACGATGCGCGCGTTCTCGTCACGTCG TCGTACCAGATGCGCCGGGCGTTGCTCGATTTCCGCCGTTTCGGCATCGATCCGCAGCCCGTTTATGCGAATCTCCGACG CGCGCAAACGGGCTGGCTGCCCCGCTGGCGCAATGTGGCCAACGCCGAACAGGCGCTGCACGAGCTGGTCGGGATCGCGC AATTCCACGTTTATCGTTGGCTCGGCTGGTTTTGA
Upstream 100 bases:
>100_bases CGTCGCGTCAGGGCCGTATCGTCAGCCGTCCATAAAAAGACACCATACCCCAATCAAATTGATTCTGTTCGATTCATTTG TACTTCTCTTCATCGGTTTC
Downstream 100 bases:
>100_bases CGACGGCGCGCAAACCTGCGCGAAAATCGCTGCACCACCCTGGATGGCAGACGCGTGACGAAGTGCGCGAAGTGTTGCGC GACTTCAACGGGGCCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTHRTDTGVQPPPDGVARIHKVA ALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTS SYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF
Sequences:
>Translated_224_residues MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTHRTDTGVQPPPDGVARIHKVA ALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTS SYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF >Mature_224_residues MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTHRTDTGVQPPPDGVARIHKVA ALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTS SYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25082; Mature: 25082
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC RTDTGVQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHC GVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRRFGIDPQP CCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCH VYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC RTDTGVQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHC GVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRRFGIDPQP CCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCH VYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA