Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689512

Identifier: 116689512

GI number: 116689512

Start: 1643402

End: 1644076

Strand: Reverse

Name: 116689512

Synonym: Bcen2424_1490

Alternate gene names: NA

Gene position: 1644076-1643402 (Counterclockwise)

Preceding gene: 116689514

Following gene: 116689511

Centisome position: 47.19

GC content: 65.93

Gene sequence:

>675_bases
ATGCTCTGCCGCAAGCAGCGTCGAACCATTTCGATCGTCGCCGCCGCGCTGTTCTGGCTGCTGGCGACGGGCTGGCTCGC
AGCCCCGCTGATCGCCTGGAGCGAGGCCGGCGTCACGCCGGTCGAGCATCCCGACATGCACGGGCGAACCACGCTGATCC
TGATCGGCGCCGGCACGCACCGCACCGACACCGGAGTGCAGCCACCGCCCGACGGCGTCGCGCGCATCCACAAGGTTGCG
GCACTCTATCGCACGTGCCGGCAGCAGGCCGAACGCTGCACCGTGGTGATGTCGGGCGGCGACCCGCAGCATCACGGCGA
CACCGAGGCAGCCGTCTACGGACGCCAACTCGTCGCTGAAGGTGTGGCGCCGGCCGACCTCGTGCTCGAACCGAACAGCC
GCACAACCTACGAAAACGCGAAATTCACTGCATCTATACTACGCTCACAGTATGACGATGCGCGCGTTCTCGTCACGTCG
TCGTACCAGATGCGCCGGGCGTTGCTCGATTTCCGCCGTTTCGGCATCGATCCGCAGCCCGTTTATGCGAATCTCCGACG
CGCGCAAACGGGCTGGCTGCCCCGCTGGCGCAATGTGGCCAACGCCGAACAGGCGCTGCACGAGCTGGTCGGGATCGCGC
AATTCCACGTTTATCGTTGGCTCGGCTGGTTTTGA

Upstream 100 bases:

>100_bases
CGTCGCGTCAGGGCCGTATCGTCAGCCGTCCATAAAAAGACACCATACCCCAATCAAATTGATTCTGTTCGATTCATTTG
TACTTCTCTTCATCGGTTTC

Downstream 100 bases:

>100_bases
CGACGGCGCGCAAACCTGCGCGAAAATCGCTGCACCACCCTGGATGGCAGACGCGTGACGAAGTGCGCGAAGTGTTGCGC
GACTTCAACGGGGCCTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTHRTDTGVQPPPDGVARIHKVA
ALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTS
SYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF

Sequences:

>Translated_224_residues
MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTHRTDTGVQPPPDGVARIHKVA
ALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTS
SYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF
>Mature_224_residues
MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTHRTDTGVQPPPDGVARIHKVA
ALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTS
SYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25082; Mature: 25082

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
RTDTGVQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHC
GVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRRFGIDPQP
CCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCH
VYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
RTDTGVQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHC
GVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRRFGIDPQP
CCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCH
VYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLGWF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA