Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689490

Identifier: 116689490

GI number: 116689490

Start: 1622002

End: 1623012

Strand: Reverse

Name: 116689490

Synonym: Bcen2424_1468

Alternate gene names: NA

Gene position: 1623012-1622002 (Counterclockwise)

Preceding gene: 116689491

Following gene: 116689489

Centisome position: 46.59

GC content: 68.74

Gene sequence:

>1011_bases
ATGACTCACGGTAACGACACGCCCGCGACGCCTCTGCCGCGTCGTACCTTCCTGGCCCAGGCCGGCGCCGGGCTCGCGGC
CGGCGTCGCGCTGGCCGCAGGCACGCCCGTGCGTGCCGCCGCCGCGACGGTGCCGGCGCCCGCGACACCGGGCGCCACGC
CGTTCTGGCCGGACGGCGCGCGGCTCGTGATCTCGATCTCGATGCAGTTCGAGGCGGGCGGACAACCGCCCACGGGCGCG
GACAGTCCGTTTCCGGCCGTCGCGTTTCCGCCGTCGGTGCCGGTCGATCTCGCCTCGGCCACCTGGTTCGCATATGGCTA
TCGGGAAGGGATTCCGCGCCTGCTCGACCTGTGGGACCGGCACGGCGTGAAAGTGACGTCGCACATGATCGGGGAAGCCG
CGCGCCGGCATCCCGAACTGGCGCGCGAAATCGTATCGCGCGGCCACGAAGCCGCCGCGCACGGCCCGACGTGGCGCGCC
CAATTCGCGATGAGCCGCGACGACGAGCGCCGCTTCCTGACCGACGCGCGCGACATGGTCGAAGCGGCGACCGGCCAGCG
TCCGACCGGCTACAACTGCAACTGGCTGCGGCGCGGCCCGCATACGCTGTCGCTGCTGCAGGAACTCGGCTACACGTATC
ACATCGACGACGTCAGTCGCGACGAACCGTTCATCGAGACCGTCGGCGGTCGCGATTTCGTGGTGGTCCCGTACACGCTG
CGCAACAACGACATCCTGCTGATCGAAGGCCGTCACTACTCGCCGACGATGTTCGTCGAGCAGATCAAGCTCGATTTCGA
CCAGCTGTACGCGGAAGCCGGGCAGCGGCGCAGATTGATGTCGATCAGTGCGCATGACCGGATCAGCGGCACGCCGCAGA
TGGTCCGCGCGTGGGACGACTTCCTGCACTACGCTCGATCACACCCCGGGGTCGCTTTCATGCGCAAGGACGACATTGCG
CGCTTCGCGCTGCACAGCCCGTCGACGCTGCGCGAGACCGAAACGATCTGA

Upstream 100 bases:

>100_bases
TCTACCGGATCGACCACGGCCGGATCGCGGAAAACTGGCATATCGAGGACAACCTGACGCTGATGCGTCAGCTCGGGCTC
GTCGGCTGACGGAGGGGACG

Downstream 100 bases:

>100_bases
CCGGATTCCGTTCAACTCATCACCCAGGAGAGACTTTCATGGACGATCCGCTCCACGGAAAGACAGTACTCGTCGTCGGC
GGCAGCTCCGGCATCGGCGC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase; Chitooligosaccharide Deacetylase Protein; Deacetylase; Uricase; Saccharide Deacetylase Slightly; Polysaccharide Deacetylase Protein Pda4B; Hydrolase; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTHGNDTPATPLPRRTFLAQAGAGLAAGVALAAGTPVRAAAATVPAPATPGATPFWPDGARLVISISMQFEAGGQPPTGA
DSPFPAVAFPPSVPVDLASATWFAYGYREGIPRLLDLWDRHGVKVTSHMIGEAARRHPELAREIVSRGHEAAAHGPTWRA
QFAMSRDDERRFLTDARDMVEAATGQRPTGYNCNWLRRGPHTLSLLQELGYTYHIDDVSRDEPFIETVGGRDFVVVPYTL
RNNDILLIEGRHYSPTMFVEQIKLDFDQLYAEAGQRRRLMSISAHDRISGTPQMVRAWDDFLHYARSHPGVAFMRKDDIA
RFALHSPSTLRETETI

Sequences:

>Translated_336_residues
MTHGNDTPATPLPRRTFLAQAGAGLAAGVALAAGTPVRAAAATVPAPATPGATPFWPDGARLVISISMQFEAGGQPPTGA
DSPFPAVAFPPSVPVDLASATWFAYGYREGIPRLLDLWDRHGVKVTSHMIGEAARRHPELAREIVSRGHEAAAHGPTWRA
QFAMSRDDERRFLTDARDMVEAATGQRPTGYNCNWLRRGPHTLSLLQELGYTYHIDDVSRDEPFIETVGGRDFVVVPYTL
RNNDILLIEGRHYSPTMFVEQIKLDFDQLYAEAGQRRRLMSISAHDRISGTPQMVRAWDDFLHYARSHPGVAFMRKDDIA
RFALHSPSTLRETETI
>Mature_335_residues
THGNDTPATPLPRRTFLAQAGAGLAAGVALAAGTPVRAAAATVPAPATPGATPFWPDGARLVISISMQFEAGGQPPTGAD
SPFPAVAFPPSVPVDLASATWFAYGYREGIPRLLDLWDRHGVKVTSHMIGEAARRHPELAREIVSRGHEAAAHGPTWRAQ
FAMSRDDERRFLTDARDMVEAATGQRPTGYNCNWLRRGPHTLSLLQELGYTYHIDDVSRDEPFIETVGGRDFVVVPYTLR
NNDILLIEGRHYSPTMFVEQIKLDFDQLYAEAGQRRRLMSISAHDRISGTPQMVRAWDDFLHYARSHPGVAFMRKDDIAR
FALHSPSTLRETETI

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37076; Mature: 36945

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHGNDTPATPLPRRTFLAQAGAGLAAGVALAAGTPVRAAAATVPAPATPGATPFWPDGA
CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC
RLVISISMQFEAGGQPPTGADSPFPAVAFPPSVPVDLASATWFAYGYREGIPRLLDLWDR
EEEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
HGVKVTSHMIGEAARRHPELAREIVSRGHEAAAHGPTWRAQFAMSRDDERRFLTDARDMV
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
EAATGQRPTGYNCNWLRRGPHTLSLLQELGYTYHIDDVSRDEPFIETVGGRDFVVVPYTL
HHHCCCCCCCCCCCCEECCCHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEEEEE
RNNDILLIEGRHYSPTMFVEQIKLDFDQLYAEAGQRRRLMSISAHDRISGTPQMVRAWDD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
FLHYARSHPGVAFMRKDDIARFALHSPSTLRETETI
HHHHHHCCCCEEEEECCCHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
THGNDTPATPLPRRTFLAQAGAGLAAGVALAAGTPVRAAAATVPAPATPGATPFWPDGA
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC
RLVISISMQFEAGGQPPTGADSPFPAVAFPPSVPVDLASATWFAYGYREGIPRLLDLWDR
EEEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
HGVKVTSHMIGEAARRHPELAREIVSRGHEAAAHGPTWRAQFAMSRDDERRFLTDARDMV
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
EAATGQRPTGYNCNWLRRGPHTLSLLQELGYTYHIDDVSRDEPFIETVGGRDFVVVPYTL
HHHCCCCCCCCCCCCEECCCHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEEEEE
RNNDILLIEGRHYSPTMFVEQIKLDFDQLYAEAGQRRRLMSISAHDRISGTPQMVRAWDD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
FLHYARSHPGVAFMRKDDIARFALHSPSTLRETETI
HHHHHHCCCCEEEEECCCHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA