Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689304

Identifier: 116689304

GI number: 116689304

Start: 1411662

End: 1412015

Strand: Reverse

Name: 116689304

Synonym: Bcen2424_1282

Alternate gene names: NA

Gene position: 1412015-1411662 (Counterclockwise)

Preceding gene: 116689306

Following gene: 116689303

Centisome position: 40.53

GC content: 62.99

Gene sequence:

>354_bases
ATGCCCCGCCAGACGGGCGATTCCGGGCAATTTGCACGATCATCCGTCATCGTGCTATCATGTCGCCTGTTTCAACATTC
AATCTCTGTCTTTTCGATTTTGAGCGAAGTCCGTCCGCACGTTGCGGCCCGGTGCCTCGATCGAAATTGCATCCACAGGA
AAGCCCGCCCGACAGGCCCGCTTTTCTCGTTTCGCTGCCCCTCCGGGGCGTTGCCGGCACGCCGGACCCATCGTCCGCAC
CGGCATCCGCCGCCTGCATCACGCGGCCCATTCTTCATGAGCGCACTGTCGCGACGGCCCATCGGGCCCGCGTCGAAGCA
GCCCCTTGGCCCTTTGCTGCCCCCTGTGCAGTAA

Upstream 100 bases:

>100_bases
ATCAGTTCGGTCATCCGGTTCCTCGCGAATTCAGCCCCGTCGCGGCGGCCGGCACGGCCGCGCCGCGCGCCGCCGATCAT
ACCCGAGCAGGCTCCCCGGG

Downstream 100 bases:

>100_bases
GTGCTTAATGGTCTGCCCCGACGCGCAGCACACGACACCGCGCTCGCCGGCAAACCGTGTCGGACGGCCTGCCCGTTCCG
GCGCTGTCAAAGGAGTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MPRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGPLFSFRCPSGALPARRTHRPH
RHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ

Sequences:

>Translated_117_residues
MPRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGPLFSFRCPSGALPARRTHRPH
RHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ
>Mature_116_residues
PRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGPLFSFRCPSGALPARRTHRPHR
HPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12920; Mature: 12789

Theoretical pI: Translated: 12.50; Mature: 12.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LFSFRCPSGALPARRTHRPHRHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRQTGDSGQFARSSVIVLSCRLFQHSISVFSILSEVRPHVAARCLDRNCIHRKARPTGP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LFSFRCPSGALPARRTHRPHRHPPPASRGPFFMSALSRRPIGPASKQPLGPLLPPVQ
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA