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The map label for this gene is yliI [C]

Identifier: 116622022

GI number: 116622022

Start: 3687274

End: 3688590

Strand: Direct

Name: yliI [C]

Synonym: Acid_2907

Alternate gene names: 116622022

Gene position: 3687274-3688590 (Clockwise)

Preceding gene: 116622021

Following gene: 116622023

Centisome position: 37.0

GC content: 58.01

Gene sequence:

>1317_bases
ATGATATCCAACATACCTGGAATGATCATTAAGAAACGATTTCTTTCGCTAGTCTCCAGCGCAGTGGCCATAAGCGGCCT
GCTGGCGTGGGCAGACGCCTATCCGGATAAGGTGCTGACGGGAAAAGCCGCGTTCAGCGACGTGATTACGCAGAAGCCGG
GCCTCTTCCGGAAGCTGACGCCTGCGGATCTCCCAGCACCCTATGCGACTTCGTCCGTTAGCGGCTTTCCGCGTGTGGTC
GCGCGGCCGGCTGGGGCGCTGCCGCAAGCACTGCCTGGGTTTGTCGTTAACCTCTATGCTTCCGACCTGAAGACTCCGCG
AGCCTTGAAGCGGGCTCCGAATGGGGACGTCTTCCTGGCCGAAAACGGCAGCAGCCAAATCCGTGTGTACCGAGGGATCG
GCAGCGATGGAAAATCGGCCACGGAATCTGTCTTTGCCACAGGTGTCGGCACGGTTTTCGGGATGGCTTTCTATCCGCCG
GGCGACGATCCCAAATGGCTCTACGTCTCGAACATGACCACCGTCTATCGCTTTGGGTATTCGCGCAATGATCTCACTGC
CACGGGTAAACCGGAGACGATCATCAGCGGGATTCCGGGCGGAGGACATGTGACCAGGGACTTGGCCTTTTCCCGAGATG
GCAAGAGCCTCTTCGTGGCGATCGGGTCTCAGTCGAATGTCAACGATCCAGATGAACGCCCGGCCGAGAAGAACCGCGCC
AATGTTCTCGAATACACACCCGACGGCAAGTTCGTCAGAGTCTATGGTGGTGGCATCCGCAACCCCGTTGGTCTCGCCGT
CAACCCGACAACGGGCGAGCTCTGGTGCTCCGTGAACGAACGTGACGGGTTGGGAGATAATCTGGTGCCTGATTACATCA
CTCACATCGAGCCGGGCGGCTTCTATGGCTGGCCCTGGTTCTACATCGGCGGCAATCAGGATCCCCGTCTCGCCGGCAAA
CACCCCGAACTCAAAGACAAGGTAATCGTGCCTGACGTATTGCTGCAACCGCACTTCGCGTCACTGCAGATGATGTTTTA
TGAAGGCACGCAGTTCCCCGCTGAATACAAGGGCGATATCTTCGCCGCGCAGCACGGATCCTGGAACCGCAGCGTTCGAA
CCGGGTACGAAGTGATACGCGTACAACTCAAAAACAGCAAGGCCAATGGAACCTATGAAGACTTCCTGACGGGCTTCGTC
CTGGAGAACGGTGAGGTATGGGGACGTCCGGTCGGCGTCGCAGCCGCTTCCGATGGATCTCTGCTGGTTTCTGATGACGG
CTCCGGTTCCATTTGGAGAGTCAGCCGCTCAAAGTAA

Upstream 100 bases:

>100_bases
CGTGAGGCGGGACTCGCTGCTCGCCTCGGGATTGGTGTGGTTCACCAGCTAGCGCGGGGTGTTCGCCAGGAACCAGATGT
AAATATCAAGCGCGGGCCGC

Downstream 100 bases:

>100_bases
AGAGTCCCAAAACACGGCCGGGAAGGTAGTTGACGCTGGCCCGTTGCTTCATGTTGTTCACCACCTGCCGCAGCCTGTTC
GCCAGGAATGCGATGCGCAC

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: SNDH [H]

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MISNIPGMIIKKRFLSLVSSAVAISGLLAWADAYPDKVLTGKAAFSDVITQKPGLFRKLTPADLPAPYATSSVSGFPRVV
ARPAGALPQALPGFVVNLYASDLKTPRALKRAPNGDVFLAENGSSQIRVYRGIGSDGKSATESVFATGVGTVFGMAFYPP
GDDPKWLYVSNMTTVYRFGYSRNDLTATGKPETIISGIPGGGHVTRDLAFSRDGKSLFVAIGSQSNVNDPDERPAEKNRA
NVLEYTPDGKFVRVYGGGIRNPVGLAVNPTTGELWCSVNERDGLGDNLVPDYITHIEPGGFYGWPWFYIGGNQDPRLAGK
HPELKDKVIVPDVLLQPHFASLQMMFYEGTQFPAEYKGDIFAAQHGSWNRSVRTGYEVIRVQLKNSKANGTYEDFLTGFV
LENGEVWGRPVGVAAASDGSLLVSDDGSGSIWRVSRSK

Sequences:

>Translated_438_residues
MISNIPGMIIKKRFLSLVSSAVAISGLLAWADAYPDKVLTGKAAFSDVITQKPGLFRKLTPADLPAPYATSSVSGFPRVV
ARPAGALPQALPGFVVNLYASDLKTPRALKRAPNGDVFLAENGSSQIRVYRGIGSDGKSATESVFATGVGTVFGMAFYPP
GDDPKWLYVSNMTTVYRFGYSRNDLTATGKPETIISGIPGGGHVTRDLAFSRDGKSLFVAIGSQSNVNDPDERPAEKNRA
NVLEYTPDGKFVRVYGGGIRNPVGLAVNPTTGELWCSVNERDGLGDNLVPDYITHIEPGGFYGWPWFYIGGNQDPRLAGK
HPELKDKVIVPDVLLQPHFASLQMMFYEGTQFPAEYKGDIFAAQHGSWNRSVRTGYEVIRVQLKNSKANGTYEDFLTGFV
LENGEVWGRPVGVAAASDGSLLVSDDGSGSIWRVSRSK
>Mature_438_residues
MISNIPGMIIKKRFLSLVSSAVAISGLLAWADAYPDKVLTGKAAFSDVITQKPGLFRKLTPADLPAPYATSSVSGFPRVV
ARPAGALPQALPGFVVNLYASDLKTPRALKRAPNGDVFLAENGSSQIRVYRGIGSDGKSATESVFATGVGTVFGMAFYPP
GDDPKWLYVSNMTTVYRFGYSRNDLTATGKPETIISGIPGGGHVTRDLAFSRDGKSLFVAIGSQSNVNDPDERPAEKNRA
NVLEYTPDGKFVRVYGGGIRNPVGLAVNPTTGELWCSVNERDGLGDNLVPDYITHIEPGGFYGWPWFYIGGNQDPRLAGK
HPELKDKVIVPDVLLQPHFASLQMMFYEGTQFPAEYKGDIFAAQHGSWNRSVRTGYEVIRVQLKNSKANGTYEDFLTGFV
LENGEVWGRPVGVAAASDGSLLVSDDGSGSIWRVSRSK

Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.burgdorferi BB024 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 47268; Mature: 47268

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNIPGMIIKKRFLSLVSSAVAISGLLAWADAYPDKVLTGKAAFSDVITQKPGLFRKLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCCEEECC
PADLPAPYATSSVSGFPRVVARPAGALPQALPGFVVNLYASDLKTPRALKRAPNGDVFLA
CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCEEEHHHHHCCCCHHHHHCCCCCEEEE
ENGSSQIRVYRGIGSDGKSATESVFATGVGTVFGMAFYPPGDDPKWLYVSNMTTVYRFGY
ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCEEEEEECC
SRNDLTATGKPETIISGIPGGGHVTRDLAFSRDGKSLFVAIGSQSNVNDPDERPAEKNRA
CCCCEEECCCCCCEEECCCCCCCEEEHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
NVLEYTPDGKFVRVYGGGIRNPVGLAVNPTTGELWCSVNERDGLGDNLVPDYITHIEPGG
CEEEECCCCCEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCC
FYGWPWFYIGGNQDPRLAGKHPELKDKVIVPDVLLQPHFASLQMMFYEGTQFPAEYKGDI
CCCCCEEEECCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHEEEEEECCCCCCCCCCCCE
FAAQHGSWNRSVRTGYEVIRVQLKNSKANGTYEDFLTGFVLENGEVWGRPVGVAAASDGS
EEECCCCCCCHHHCCEEEEEEEEECCCCCCCHHHHHEEEEEECCCCCCCEEEEEEECCCC
LLVSDDGSGSIWRVSRSK
EEEECCCCCCEEEEECCC
>Mature Secondary Structure
MISNIPGMIIKKRFLSLVSSAVAISGLLAWADAYPDKVLTGKAAFSDVITQKPGLFRKLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCCEEECC
PADLPAPYATSSVSGFPRVVARPAGALPQALPGFVVNLYASDLKTPRALKRAPNGDVFLA
CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCEEEHHHHHCCCCHHHHHCCCCCEEEE
ENGSSQIRVYRGIGSDGKSATESVFATGVGTVFGMAFYPPGDDPKWLYVSNMTTVYRFGY
ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCEEEEEECC
SRNDLTATGKPETIISGIPGGGHVTRDLAFSRDGKSLFVAIGSQSNVNDPDERPAEKNRA
CCCCEEECCCCCCEEECCCCCCCEEEHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
NVLEYTPDGKFVRVYGGGIRNPVGLAVNPTTGELWCSVNERDGLGDNLVPDYITHIEPGG
CEEEECCCCCEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCC
FYGWPWFYIGGNQDPRLAGKHPELKDKVIVPDVLLQPHFASLQMMFYEGTQFPAEYKGDI
CCCCCEEEECCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHEEEEEECCCCCCCCCCCCE
FAAQHGSWNRSVRTGYEVIRVQLKNSKANGTYEDFLTGFVLENGEVWGRPVGVAAASDGS
EEECCCCCCCHHHCCEEEEEEEEECCCCCCCHHHHHEEEEEECCCCCCCEEEEEEECCCC
LLVSDDGSGSIWRVSRSK
EEEECCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7574579 [H]