Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is iorB [H]
Identifier: 116622017
GI number: 116622017
Start: 3679661
End: 3681988
Strand: Reverse
Name: iorB [H]
Synonym: Acid_2902
Alternate gene names: 116622017
Gene position: 3681988-3679661 (Counterclockwise)
Preceding gene: 116622018
Following gene: 116622016
Centisome position: 36.95
GC content: 60.57
Gene sequence:
>2328_bases ATGAACCGGACACAAGGAGAACCCATGGAGAAGATCAATCTCGGTCGGCGTTCGATACTCCGGGCTACTGCCTTAGCTGG CGGCGGTATGATGCTTGGACTGTTTTCCCGGAATGCACGGGCACAGGCGCCGGCACAAGGGCCCGGCCGCGGCGCTCCTC CTGCGCCGGGGGGCGGGCGTGGCGGCTTTGTCCGGACACCGCTGTCACCAGCCAATTTCGTCAGCATTTCGCCTGACGGC ATCGCCTCGATAGGTTCGCCAAACACGGAGATGGGGCAGGGCTCGTTCAATCTGCTGCCGATGATGGTGGCTGAAGAGTT GGACATCGATTGGAAGAACGTCAAAATCGTGCGCACCGGAGTGGGGCCGCAATTTGGCGGTCAGTTCACCGCCGGTAGCA CCGCGACTCCCTCGAACTGGGTGCCGATGCGTCAAATCGGCGGCGCGGTACGAAGTATGCTCATCGCCGCTGCGGCACAG AACTGGGGCGTCCCGGCGGCCGAATGTTCCACCACACCGGGCCGTGTGGTTCACACCGACTCAAACCGGTCGGCGGGTTA CGGAGAACTTGCGGCGAAGGCCGCAACCATGCCCGTGCCGGACTTCAGCACGCTCAAGTTCAAAGACGCGAAGGACTACA AAATCATCGGCACCACAACGCTCGGCGGGGAAACGAAAGACATCATCCGGGGCAAGGCTACGTTTGGCATCGACATCACC GTCCCCGGAATGCTGTATGCGGTCTTCGAAAAGACCCCCGTGTCCCGCGGCAAAGTGGTCAGTGCGAACCTCGACGCCGT CAAGGCGATGAAGGGCGTGAAGCACGCCTTCATCGTGGAAGGCGCACCCGTTAACGGGAATTATCCGAATTACCTATTTG CCGATCCGGGGCTCGAGGCCGGCGTTGCGATTGTCGCGGAAAGCTGGTGGGCCGCGCAATCGGCGCGGAAGAAATTACAG GTGAAATGGGATCTCGGCCCGTGGGCGTTGCAGGACAGCGATCAGACTGCTGCCAAAGCAGAGGAACTGTCCAAACAAGC GCCGGCACGGACCCTTCGGAAGGACGGAGACACGGATGCGGTATTTCAGCGAACTGACGTCCGCGTGATCCAGAGCGCAT ACCGCTTCCCGTTCATCGCTCATAACACGCTCGAACCTCAGAACGCCACGGCGCATTACCGCAATGGCAAGGTGGAAGTC TGGTCCACCAGTCAGTTGCCCCAGACGGGGCGCCAGTTGGTGGCCCGAACCTTAGGCATTCCCGAAGCCGATGTAACCGT CCACATGGTGCGCGCCGGTGGCGGCTTCGGACGCCGCTGCTATAACGACACCATGGCGGAAGCCGCCTGGATTTCCAAAA CGGTCGGGGCGCCCGTCAAGTTGCTGTGGACTCGTGAAGACGACCTGCAGCACGACTATTATCGCCCGGGCGGATTTCAG TACCTGAAAGCCGCGATCGACCAGAACGGCAAGCTCGCTGCATGGCACGATCATTTTATTAGTTACGGTGAAGGGAATAC GTTTATTTCGGAGGGCGGATTCGATGCTGGTCAGTTTCCGGCAGGGTTGATCCGCGACTATCAGGTGCAGGCGTCGGTAT TGCCTCTGGTTTTGAAAACCGGCGCATTGCGCGCACCAGGATCCAACTGCAGCGCGTGGGTTGTTCAGTCTTTCCTCGAT GATGTCGCACACGCCGCAGGCAAAGATCCGCTGGCGTTACGGCTGGAATTGCTTGCATCGGCGCCACCACCCGCAGCGCC TGCCCCAGGGCCGGGAGGCGGGCCTCCCGGTGGAGGCAGACAGGGCATGAACCCGGCTCGGATGCGAGCGGTACTCGAGC TTGTAGCGGAAAAGTCCGGTTGGGGCAAGCGCCAGTTGCCGCCGCGGACGGCGCTCGGCATCGCGAGCCATTTCAGCGCC GGCGGCTACGTTGCGGAGGTGGCCGAAGTCACCGTAAGTGCCGACAAGAAAATCAAGGTCAACAGGGTCTGGGTAGCGGC TGATGTCGGCAGTCAAATTGTCAATCCGGGCGCCGCGGAGCATGTGGTGCAAGGCGCCGTCATCGACGGGATGAGCGAAC TGATCCAGGAGATCACTCTGAAGAACGGCCGGGTGGTGCAATCGAACTTTCATCAGCATTCGGTATTGGATCTGCCTCAG GCACCCCAGATTGACGTACACTTCCTGAAATCGAACAACTCACCAGGCGGATTAGGCGAACCCCCGTTGCCCCCGATTCT CCCCGCTGTATGCAACGCGATTTTTAAGGCCACAGGAGAGCGCATCCACACTTTACCCATGACGAAACAGGGCTACCGCT TTGCCTAA
Upstream 100 bases:
>100_bases CGGCCATGGCAGGTAACATCTGCCGTTGCGGAACGTATGGGCGGCTTCGCGCTGCAATCCACAAAGCATCGGATGCGATG AAATCAGGAGCGACGAAGCG
Downstream 100 bases:
>100_bases ATTACCCTGAAGGGCACCTGAATGGATATATTCGAGGAATTAGTCCGGCTCCGCAATCTGGGACAGAAATGCGCACTTGC CACCATAGTGGAAGTGCGCG
Product: aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 775; Mature: 775
Protein sequence:
>775_residues MNRTQGEPMEKINLGRRSILRATALAGGGMMLGLFSRNARAQAPAQGPGRGAPPAPGGGRGGFVRTPLSPANFVSISPDG IASIGSPNTEMGQGSFNLLPMMVAEELDIDWKNVKIVRTGVGPQFGGQFTAGSTATPSNWVPMRQIGGAVRSMLIAAAAQ NWGVPAAECSTTPGRVVHTDSNRSAGYGELAAKAATMPVPDFSTLKFKDAKDYKIIGTTTLGGETKDIIRGKATFGIDIT VPGMLYAVFEKTPVSRGKVVSANLDAVKAMKGVKHAFIVEGAPVNGNYPNYLFADPGLEAGVAIVAESWWAAQSARKKLQ VKWDLGPWALQDSDQTAAKAEELSKQAPARTLRKDGDTDAVFQRTDVRVIQSAYRFPFIAHNTLEPQNATAHYRNGKVEV WSTSQLPQTGRQLVARTLGIPEADVTVHMVRAGGGFGRRCYNDTMAEAAWISKTVGAPVKLLWTREDDLQHDYYRPGGFQ YLKAAIDQNGKLAAWHDHFISYGEGNTFISEGGFDAGQFPAGLIRDYQVQASVLPLVLKTGALRAPGSNCSAWVVQSFLD DVAHAAGKDPLALRLELLASAPPPAAPAPGPGGGPPGGGRQGMNPARMRAVLELVAEKSGWGKRQLPPRTALGIASHFSA GGYVAEVAEVTVSADKKIKVNRVWVAADVGSQIVNPGAAEHVVQGAVIDGMSELIQEITLKNGRVVQSNFHQHSVLDLPQ APQIDVHFLKSNNSPGGLGEPPLPPILPAVCNAIFKATGERIHTLPMTKQGYRFA
Sequences:
>Translated_775_residues MNRTQGEPMEKINLGRRSILRATALAGGGMMLGLFSRNARAQAPAQGPGRGAPPAPGGGRGGFVRTPLSPANFVSISPDG IASIGSPNTEMGQGSFNLLPMMVAEELDIDWKNVKIVRTGVGPQFGGQFTAGSTATPSNWVPMRQIGGAVRSMLIAAAAQ NWGVPAAECSTTPGRVVHTDSNRSAGYGELAAKAATMPVPDFSTLKFKDAKDYKIIGTTTLGGETKDIIRGKATFGIDIT VPGMLYAVFEKTPVSRGKVVSANLDAVKAMKGVKHAFIVEGAPVNGNYPNYLFADPGLEAGVAIVAESWWAAQSARKKLQ VKWDLGPWALQDSDQTAAKAEELSKQAPARTLRKDGDTDAVFQRTDVRVIQSAYRFPFIAHNTLEPQNATAHYRNGKVEV WSTSQLPQTGRQLVARTLGIPEADVTVHMVRAGGGFGRRCYNDTMAEAAWISKTVGAPVKLLWTREDDLQHDYYRPGGFQ YLKAAIDQNGKLAAWHDHFISYGEGNTFISEGGFDAGQFPAGLIRDYQVQASVLPLVLKTGALRAPGSNCSAWVVQSFLD DVAHAAGKDPLALRLELLASAPPPAAPAPGPGGGPPGGGRQGMNPARMRAVLELVAEKSGWGKRQLPPRTALGIASHFSA GGYVAEVAEVTVSADKKIKVNRVWVAADVGSQIVNPGAAEHVVQGAVIDGMSELIQEITLKNGRVVQSNFHQHSVLDLPQ APQIDVHFLKSNNSPGGLGEPPLPPILPAVCNAIFKATGERIHTLPMTKQGYRFA >Mature_775_residues MNRTQGEPMEKINLGRRSILRATALAGGGMMLGLFSRNARAQAPAQGPGRGAPPAPGGGRGGFVRTPLSPANFVSISPDG IASIGSPNTEMGQGSFNLLPMMVAEELDIDWKNVKIVRTGVGPQFGGQFTAGSTATPSNWVPMRQIGGAVRSMLIAAAAQ NWGVPAAECSTTPGRVVHTDSNRSAGYGELAAKAATMPVPDFSTLKFKDAKDYKIIGTTTLGGETKDIIRGKATFGIDIT VPGMLYAVFEKTPVSRGKVVSANLDAVKAMKGVKHAFIVEGAPVNGNYPNYLFADPGLEAGVAIVAESWWAAQSARKKLQ VKWDLGPWALQDSDQTAAKAEELSKQAPARTLRKDGDTDAVFQRTDVRVIQSAYRFPFIAHNTLEPQNATAHYRNGKVEV WSTSQLPQTGRQLVARTLGIPEADVTVHMVRAGGGFGRRCYNDTMAEAAWISKTVGAPVKLLWTREDDLQHDYYRPGGFQ YLKAAIDQNGKLAAWHDHFISYGEGNTFISEGGFDAGQFPAGLIRDYQVQASVLPLVLKTGALRAPGSNCSAWVVQSFLD DVAHAAGKDPLALRLELLASAPPPAAPAPGPGGGPPGGGRQGMNPARMRAVLELVAEKSGWGKRQLPPRTALGIASHFSA GGYVAEVAEVTVSADKKIKVNRVWVAADVGSQIVNPGAAEHVVQGAVIDGMSELIQEITLKNGRVVQSNFHQHSVLDLPQ APQIDVHFLKSNNSPGGLGEPPLPPILPAVCNAIFKATGERIHTLPMTKQGYRFA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789230, Length=383, Percent_Identity=25.3263707571802, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI1786478, Length=426, Percent_Identity=24.6478873239437, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 82308; Mature: 82308
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTQGEPMEKINLGRRSILRATALAGGGMMLGLFSRNARAQAPAQGPGRGAPPAPGGGR CCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GGFVRTPLSPANFVSISPDGIASIGSPNTEMGQGSFNLLPMMVAEELDIDWKNVKIVRTG CCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEC VGPQFGGQFTAGSTATPSNWVPMRQIGGAVRSMLIAAAAQNWGVPAAECSTTPGRVVHTD CCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECC SNRSAGYGELAAKAATMPVPDFSTLKFKDAKDYKIIGTTTLGGETKDIIRGKATFGIDIT CCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEECCCCCHHHHCCCEEEEEEEE VPGMLYAVFEKTPVSRGKVVSANLDAVKAMKGVKHAFIVEGAPVNGNYPNYLFADPGLEA CCHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCCC GVAIVAESWWAAQSARKKLQVKWDLGPWALQDSDQTAAKAEELSKQAPARTLRKDGDTDA CEEEEEHHHHHHHHHCCEEEEEECCCCCEECCCCHHHHHHHHHHHHCCHHHHHCCCCCHH VFQRTDVRVIQSAYRFPFIAHNTLEPQNATAHYRNGKVEVWSTSQLPQTGRQLVARTLGI HHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCC PEADVTVHMVRAGGGFGRRCYNDTMAEAAWISKTVGAPVKLLWTREDDLQHDYYRPGGFQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHH YLKAAIDQNGKLAAWHDHFISYGEGNTFISEGGFDAGQFPAGLIRDYQVQASVLPLVLKT HHHHHHCCCCCEEEEEHHHEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GALRAPGSNCSAWVVQSFLDDVAHAAGKDPLALRLELLASAPPPAAPAPGPGGGPPGGGR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC QGMNPARMRAVLELVAEKSGWGKRQLPPRTALGIASHFSAGGYVAEVAEVTVSADKKIKV CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEE NRVWVAADVGSQIVNPGAAEHVVQGAVIDGMSELIQEITLKNGRVVQSNFHQHSVLDLPQ EEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC APQIDVHFLKSNNSPGGLGEPPLPPILPAVCNAIFKATGERIHTLPMTKQGYRFA CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC >Mature Secondary Structure MNRTQGEPMEKINLGRRSILRATALAGGGMMLGLFSRNARAQAPAQGPGRGAPPAPGGGR CCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GGFVRTPLSPANFVSISPDGIASIGSPNTEMGQGSFNLLPMMVAEELDIDWKNVKIVRTG CCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEC VGPQFGGQFTAGSTATPSNWVPMRQIGGAVRSMLIAAAAQNWGVPAAECSTTPGRVVHTD CCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECC SNRSAGYGELAAKAATMPVPDFSTLKFKDAKDYKIIGTTTLGGETKDIIRGKATFGIDIT CCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEECCCCCHHHHCCCEEEEEEEE VPGMLYAVFEKTPVSRGKVVSANLDAVKAMKGVKHAFIVEGAPVNGNYPNYLFADPGLEA CCHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCCC GVAIVAESWWAAQSARKKLQVKWDLGPWALQDSDQTAAKAEELSKQAPARTLRKDGDTDA CEEEEEHHHHHHHHHCCEEEEEECCCCCEECCCCHHHHHHHHHHHHCCHHHHHCCCCCHH VFQRTDVRVIQSAYRFPFIAHNTLEPQNATAHYRNGKVEVWSTSQLPQTGRQLVARTLGI HHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCC PEADVTVHMVRAGGGFGRRCYNDTMAEAAWISKTVGAPVKLLWTREDDLQHDYYRPGGFQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHH YLKAAIDQNGKLAAWHDHFISYGEGNTFISEGGFDAGQFPAGLIRDYQVQASVLPLVLKT HHHHHHCCCCCEEEEEHHHEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GALRAPGSNCSAWVVQSFLDDVAHAAGKDPLALRLELLASAPPPAAPAPGPGGGPPGGGR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC QGMNPARMRAVLELVAEKSGWGKRQLPPRTALGIASHFSAGGYVAEVAEVTVSADKKIKV CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEE NRVWVAADVGSQIVNPGAAEHVVQGAVIDGMSELIQEITLKNGRVVQSNFHQHSVLDLPQ EEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC APQIDVHFLKSNNSPGGLGEPPLPPILPAVCNAIFKATGERIHTLPMTKQGYRFA CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]