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The map label for this gene is yqeB [H]

Identifier: 116622016

GI number: 116622016

Start: 3678803

End: 3679639

Strand: Reverse

Name: yqeB [H]

Synonym: Acid_2901

Alternate gene names: 116622016

Gene position: 3679639-3678803 (Counterclockwise)

Preceding gene: 116622017

Following gene: 116622015

Centisome position: 36.92

GC content: 59.02

Gene sequence:

>837_bases
ATGGATATATTCGAGGAATTAGTCCGGCTCCGCAATCTGGGACAGAAATGCGCACTTGCCACCATAGTGGAAGTGCGCGG
CTCCATCCCCAGCTTCGAGAGCGCAAAAATTCTAGTCCGCGAGGACGGGTCCATGATCGGCACCATCGGCGGTGGCTGCG
TGGAGGCAGAGGTGTGGAATGCCGCCCGGGAGGTGATTCAAGCGGAGAAGCCCAAACACCTCAACTTCAACCTGGGCCAG
GACGCGGCCTACGATAACGGCCTGATCTGCGGCGGACAACTCGACGTATTTGTGGAGCCTATCATGCCGGTGCCCCACGC
GTTCATCTTCGGTGCCGGACACATTTCCAAGAGTCTCTCCAAGGTGGCGACCCTGGCCGGTTTCAATAGCGTCGTGATCG
ACAATCGCGACACCTTCGCCAATCACGAGCGCTTTCCGGAAGCCGTGGCCGTACACGCTGAAGAGTACGAAGAGGTTTTC
CCGCGCCTGGCGATCAATGAAACCAGCTACATCGTCATCGTGACTCGCGGCCATCGCGACGATATGCGAGTGCTCCAACT
GGCGATCGCCACGCCGGCCCGCTATATCTCCATGATCGGCAGCAAGCGCAAGGTGCTGAACGTAATTCGCGAACTCGAAA
AACAGGGCATCGCGCGCGAAGCGTTCGAGCGCATCCATGCCCCCATGGGGCTGGACATCGGCGCGATTTCTCCCGAAGAG
ATTGCCATCTCCGTGACAGCCGAGATGATCGCCGTTCGCCGAAATGCTGGATCCAATTGGCGCGCGCTCTCGCTCTCTGT
GTTCGACCGAACGGAGCGCACTGGAGTTTCGAAGTGA

Upstream 100 bases:

>100_bases
ATGCAACGCGATTTTTAAGGCCACAGGAGAGCGCATCCACACTTTACCCATGACGAAACAGGGCTACCGCTTTGCCTAAA
TTACCCTGAAGGGCACCTGA

Downstream 100 bases:

>100_bases
GTCCTGTGGTCCACCAACCGGATTGGGCGACCATCTTTGGCGCGGTCACTTCCCGCAGTCACAACTGCGGTATTCTCAGC
GACTGGGGAACGTATGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDIFEELVRLRNLGQKCALATIVEVRGSIPSFESAKILVREDGSMIGTIGGGCVEAEVWNAAREVIQAEKPKHLNFNLGQ
DAAYDNGLICGGQLDVFVEPIMPVPHAFIFGAGHISKSLSKVATLAGFNSVVIDNRDTFANHERFPEAVAVHAEEYEEVF
PRLAINETSYIVIVTRGHRDDMRVLQLAIATPARYISMIGSKRKVLNVIRELEKQGIAREAFERIHAPMGLDIGAISPEE
IAISVTAEMIAVRRNAGSNWRALSLSVFDRTERTGVSK

Sequences:

>Translated_278_residues
MDIFEELVRLRNLGQKCALATIVEVRGSIPSFESAKILVREDGSMIGTIGGGCVEAEVWNAAREVIQAEKPKHLNFNLGQ
DAAYDNGLICGGQLDVFVEPIMPVPHAFIFGAGHISKSLSKVATLAGFNSVVIDNRDTFANHERFPEAVAVHAEEYEEVF
PRLAINETSYIVIVTRGHRDDMRVLQLAIATPARYISMIGSKRKVLNVIRELEKQGIAREAFERIHAPMGLDIGAISPEE
IAISVTAEMIAVRRNAGSNWRALSLSVFDRTERTGVSK
>Mature_278_residues
MDIFEELVRLRNLGQKCALATIVEVRGSIPSFESAKILVREDGSMIGTIGGGCVEAEVWNAAREVIQAEKPKHLNFNLGQ
DAAYDNGLICGGQLDVFVEPIMPVPHAFIFGAGHISKSLSKVATLAGFNSVVIDNRDTFANHERFPEAVAVHAEEYEEVF
PRLAINETSYIVIVTRGHRDDMRVLQLAIATPARYISMIGSKRKVLNVIRELEKQGIAREAFERIHAPMGLDIGAISPEE
IAISVTAEMIAVRRNAGSNWRALSLSVFDRTERTGVSK

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=257, Percent_Identity=36.9649805447471, Blast_Score=164, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 30554; Mature: 30554

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFEELVRLRNLGQKCALATIVEVRGSIPSFESAKILVREDGSMIGTIGGGCVEAEVWN
CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCEEHHHHHH
AAREVIQAEKPKHLNFNLGQDAAYDNGLICGGQLDVFVEPIMPVPHAFIFGAGHISKSLS
HHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHEEECHHHHHHHH
KVATLAGFNSVVIDNRDTFANHERFPEAVAVHAEEYEEVFPRLAINETSYIVIVTRGHRD
HHHHHHCCCEEEEECCHHHCCHHHCCHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCC
DMRVLQLAIATPARYISMIGSKRKVLNVIRELEKQGIAREAFERIHAPMGLDIGAISPEE
HHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHH
IAISVTAEMIAVRRNAGSNWRALSLSVFDRTERTGVSK
EEEEHHHHHHHHHHCCCCCEEEEEEEEHHCHHHCCCCC
>Mature Secondary Structure
MDIFEELVRLRNLGQKCALATIVEVRGSIPSFESAKILVREDGSMIGTIGGGCVEAEVWN
CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCEEHHHHHH
AAREVIQAEKPKHLNFNLGQDAAYDNGLICGGQLDVFVEPIMPVPHAFIFGAGHISKSLS
HHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHEEECHHHHHHHH
KVATLAGFNSVVIDNRDTFANHERFPEAVAVHAEEYEEVFPRLAINETSYIVIVTRGHRD
HHHHHHCCCEEEEECCHHHCCHHHCCHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCC
DMRVLQLAIATPARYISMIGSKRKVLNVIRELEKQGIAREAFERIHAPMGLDIGAISPEE
HHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHH
IAISVTAEMIAVRRNAGSNWRALSLSVFDRTERTGVSK
EEEEHHHHHHHHHHCCCCCEEEEEEEEHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]