Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621987
Identifier: 116621987
GI number: 116621987
Start: 3633053
End: 3634861
Strand: Reverse
Name: 116621987
Synonym: Acid_2872
Alternate gene names: NA
Gene position: 3634861-3633053 (Counterclockwise)
Preceding gene: 116621988
Following gene: 116621986
Centisome position: 36.47
GC content: 63.07
Gene sequence:
>1809_bases TTGCCGCGACTCGGCCGCTTCGAATACGTTCATATAGTGCCCGTCCTCCGGCGCTACCCGATGCTCGCTCTCGCGCTGTT GCTGGCCACTCCGCTGACAGCCGCTGTCGCCCCCTCCTTACAACCTTCGAAGCCCAGCCCGTGGCAGGTCGGTGCCATCG TCACTTGGACCGCAACTCCGGCCGCCGGCGCCGCCGACGCCTTTTGGTACCGGTTTCGGGCGCGCCGCGTCGGATCCCCC TTTCGCGTTTGGAAAGACTTCGGTCCCGACAACACCTTCGAGTGGACCGAATCCGAGCATCCTGGGAGCTTCGAGATCGA AGTCGCTGCCAGGGACCGCGTCACCGGCGCCGTTTCCACCGCCAGAGCCGGCTATACCCTGCTCACCAATACCAACGGCG ACCAGCCCGCCATTCTTGAGACGTCACATCCCCTGGTACTGCTCTTCAGCGCGCAGCCCTGCGCCCCCGGAAGCCGTATG AAAGTCCGCTTCCAATCCGCGGACGGCGTCACGCAGGACACTCCGTACAAGAACTGCGCTCCCGGCCTCAGCATGAATTT CTATCTCGCTGGATTGCGGGCTCAAACCGAATACTTCGCCTACGCCATCGTCGATGACGGCGAAGCCTTCGATTCCGGTC CCGTCCTCAGCCACACCACCGGACCGGTGACCGCCGACCTTCCCGTCACCACCATCCTGAAACCCGCGCCGCTCGATACG CCGGAGCCGGTTATCCTGCAGGAAAACGTGTTCGCCAGCCAGCTGGCCACCGATCTCGCAGGCCGCGTGATCTGGTACTA TCCCAGCGCTCCGCTGGCGTTCATGACGCGCCCCGCGGGCAACGGCACCTTCTTTGGAATTCAGCAGGATCCCCGGGGCA ATCCTTGGAACCAGGTGCTGCGCGAGTTCAACCTCATCGGCCTCGCCATTCGCGAAACCAACGCCGGGCGCGTAAATGAG CAGCTCAGCGCGCTCGGCAAGCGCTCCATCAATGCCTTTCACCACGACGCCCTGCAGTTGCCCGATGGCAACATCGCCGT TATCGGCGGCGTGGAGCAGATCCTCACCGGGGTCCAGGGTCCCGCAGCCGTCGATGTCCTCGGCGACATGGTGATCGTGC TCGATCCCAATCTGAATGTCGTCTGGAGCTGGGACGCCTTCGATCATCTCGACCCGCACCGACTCGCCACGCTCGGCGAG CAGTGCCTGCCGAATGCCTGCCCCCCGCTCCAACTCGCCGCCACCGCCAACGATTGGACTCACGCGAACGCGATCGAAGC TGCTCCCGACGGCAATCTGCTCGTCTCCTTCCGCAACCAGGACTGGGTAGTCAAGATCAATTACGATTCCGGCGAAGGCA ACGGCGATATCCTCTGGAAGCTCGGCAGCGGCGGCGATTTCCAGTTGACGCCCTCCACTCCCACCTCCTGGTTCTCGCAT CAGCACGATCCGCGCTTCGAGCCCTTCTCGACCGACCGCCTCATGATTCTCGACAACGGTAACTTCCGGCGCGACACTGA TCCGAACGCTGCATCGCGCGGACAGGTTTACCAGCTCGACGAAGCCGCGAAGACCGCGACGCTTGTCGTCAACGACAATC TCGGCCTTTACTCCCTCGCCGTTGGATCCACCGAGAAACTCTCGAATGGCAACTACTGGTTCGACGCCGGTTTCCTGCCC GATGCCTCCGGTATCTCAGGCGAGTTCAATACGGGCGGCTCCAGTATTTTTACCGTGCGCACCGCCGCGCCGGTCTACCG TTCGTACCGCCTCGCCGATATGTATAGTCCCGTGAGAGGCACGCGATGA
Upstream 100 bases:
>100_bases TATTGGCCGGAACACCCAATCTATCCTGGGGTGTCCAAACCAACGCCGCGCCTCCTTCATTCGATATCCCCAATCTCGAC TAACTACAGAAAATATCGTA
Downstream 100 bases:
>100_bases TTCTGGACCGCCGGAGCTTTATCAAATCCGCCGGCGCGGCAGCCATGGCGGCGGCGCTTCGCGGTCAGCAGCGCCAACCG AATATCGTGGTGATCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MPRLGRFEYVHIVPVLRRYPMLALALLLATPLTAAVAPSLQPSKPSPWQVGAIVTWTATPAAGAADAFWYRFRARRVGSP FRVWKDFGPDNTFEWTESEHPGSFEIEVAARDRVTGAVSTARAGYTLLTNTNGDQPAILETSHPLVLLFSAQPCAPGSRM KVRFQSADGVTQDTPYKNCAPGLSMNFYLAGLRAQTEYFAYAIVDDGEAFDSGPVLSHTTGPVTADLPVTTILKPAPLDT PEPVILQENVFASQLATDLAGRVIWYYPSAPLAFMTRPAGNGTFFGIQQDPRGNPWNQVLREFNLIGLAIRETNAGRVNE QLSALGKRSINAFHHDALQLPDGNIAVIGGVEQILTGVQGPAAVDVLGDMVIVLDPNLNVVWSWDAFDHLDPHRLATLGE QCLPNACPPLQLAATANDWTHANAIEAAPDGNLLVSFRNQDWVVKINYDSGEGNGDILWKLGSGGDFQLTPSTPTSWFSH QHDPRFEPFSTDRLMILDNGNFRRDTDPNAASRGQVYQLDEAAKTATLVVNDNLGLYSLAVGSTEKLSNGNYWFDAGFLP DASGISGEFNTGGSSIFTVRTAAPVYRSYRLADMYSPVRGTR
Sequences:
>Translated_602_residues MPRLGRFEYVHIVPVLRRYPMLALALLLATPLTAAVAPSLQPSKPSPWQVGAIVTWTATPAAGAADAFWYRFRARRVGSP FRVWKDFGPDNTFEWTESEHPGSFEIEVAARDRVTGAVSTARAGYTLLTNTNGDQPAILETSHPLVLLFSAQPCAPGSRM KVRFQSADGVTQDTPYKNCAPGLSMNFYLAGLRAQTEYFAYAIVDDGEAFDSGPVLSHTTGPVTADLPVTTILKPAPLDT PEPVILQENVFASQLATDLAGRVIWYYPSAPLAFMTRPAGNGTFFGIQQDPRGNPWNQVLREFNLIGLAIRETNAGRVNE QLSALGKRSINAFHHDALQLPDGNIAVIGGVEQILTGVQGPAAVDVLGDMVIVLDPNLNVVWSWDAFDHLDPHRLATLGE QCLPNACPPLQLAATANDWTHANAIEAAPDGNLLVSFRNQDWVVKINYDSGEGNGDILWKLGSGGDFQLTPSTPTSWFSH QHDPRFEPFSTDRLMILDNGNFRRDTDPNAASRGQVYQLDEAAKTATLVVNDNLGLYSLAVGSTEKLSNGNYWFDAGFLP DASGISGEFNTGGSSIFTVRTAAPVYRSYRLADMYSPVRGTR >Mature_601_residues PRLGRFEYVHIVPVLRRYPMLALALLLATPLTAAVAPSLQPSKPSPWQVGAIVTWTATPAAGAADAFWYRFRARRVGSPF RVWKDFGPDNTFEWTESEHPGSFEIEVAARDRVTGAVSTARAGYTLLTNTNGDQPAILETSHPLVLLFSAQPCAPGSRMK VRFQSADGVTQDTPYKNCAPGLSMNFYLAGLRAQTEYFAYAIVDDGEAFDSGPVLSHTTGPVTADLPVTTILKPAPLDTP EPVILQENVFASQLATDLAGRVIWYYPSAPLAFMTRPAGNGTFFGIQQDPRGNPWNQVLREFNLIGLAIRETNAGRVNEQ LSALGKRSINAFHHDALQLPDGNIAVIGGVEQILTGVQGPAAVDVLGDMVIVLDPNLNVVWSWDAFDHLDPHRLATLGEQ CLPNACPPLQLAATANDWTHANAIEAAPDGNLLVSFRNQDWVVKINYDSGEGNGDILWKLGSGGDFQLTPSTPTSWFSHQ HDPRFEPFSTDRLMILDNGNFRRDTDPNAASRGQVYQLDEAAKTATLVVNDNLGLYSLAVGSTEKLSNGNYWFDAGFLPD ASGISGEFNTGGSSIFTVRTAAPVYRSYRLADMYSPVRGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65480; Mature: 65349
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLGRFEYVHIVPVLRRYPMLALALLLATPLTAAVAPSLQPSKPSPWQVGAIVTWTATP CCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEEEEECCC AAGAADAFWYRFRARRVGSPFRVWKDFGPDNTFEWTESEHPGSFEIEVAARDRVTGAVST CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH ARAGYTLLTNTNGDQPAILETSHPLVLLFSAQPCAPGSRMKVRFQSADGVTQDTPYKNCA HCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC PGLSMNFYLAGLRAQTEYFAYAIVDDGEAFDSGPVLSHTTGPVTADLPVTTILKPAPLDT CCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCC PEPVILQENVFASQLATDLAGRVIWYYPSAPLAFMTRPAGNGTFFGIQQDPRGNPWNQVL CCCEEEECCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCCHHHHHH REFNLIGLAIRETNAGRVNEQLSALGKRSINAFHHDALQLPDGNIAVIGGVEQILTGVQG HHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECCHHHHHHCCCC PAAVDVLGDMVIVLDPNLNVVWSWDAFDHLDPHRLATLGEQCLPNACPPLQLAATANDWT CEEHEECCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC HANAIEAAPDGNLLVSFRNQDWVVKINYDSGEGNGDILWKLGSGGDFQLTPSTPTSWFSH CCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEECCCCCHHHHCC QHDPRFEPFSTDRLMILDNGNFRRDTDPNAASRGQVYQLDEAAKTATLVVNDNLGLYSLA CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEE VGSTEKLSNGNYWFDAGFLPDASGISGEFNTGGSSIFTVRTAAPVYRSYRLADMYSPVRG CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHEEHHHHHCCCCC TR CC >Mature Secondary Structure PRLGRFEYVHIVPVLRRYPMLALALLLATPLTAAVAPSLQPSKPSPWQVGAIVTWTATP CCCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEEEEECCC AAGAADAFWYRFRARRVGSPFRVWKDFGPDNTFEWTESEHPGSFEIEVAARDRVTGAVST CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH ARAGYTLLTNTNGDQPAILETSHPLVLLFSAQPCAPGSRMKVRFQSADGVTQDTPYKNCA HCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC PGLSMNFYLAGLRAQTEYFAYAIVDDGEAFDSGPVLSHTTGPVTADLPVTTILKPAPLDT CCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCC PEPVILQENVFASQLATDLAGRVIWYYPSAPLAFMTRPAGNGTFFGIQQDPRGNPWNQVL CCCEEEECCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCCHHHHHH REFNLIGLAIRETNAGRVNEQLSALGKRSINAFHHDALQLPDGNIAVIGGVEQILTGVQG HHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECCHHHHHHCCCC PAAVDVLGDMVIVLDPNLNVVWSWDAFDHLDPHRLATLGEQCLPNACPPLQLAATANDWT CEEHEECCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC HANAIEAAPDGNLLVSFRNQDWVVKINYDSGEGNGDILWKLGSGGDFQLTPSTPTSWFSH CCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEECCCCCHHHHCC QHDPRFEPFSTDRLMILDNGNFRRDTDPNAASRGQVYQLDEAAKTATLVVNDNLGLYSLA CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEE VGSTEKLSNGNYWFDAGFLPDASGISGEFNTGGSSIFTVRTAAPVYRSYRLADMYSPVRG CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHEEHHHHHCCCCC TR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA